Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 CASC19-255ENST00000641733 1385 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC011503.2-201ENST00000594230 1500 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 PABPC1P6-201ENST00000445594 1829 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS1Q01581 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AL353625.1-202ENST00000366273 571 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 DUTP5-201ENST00000406790 469 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 RN7SKP114-201ENST00000410327 279 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 CTSL3P-202ENST00000412179 788 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 OR52B5P-201ENST00000435337 951 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 MTND6P5-201ENST00000448266 512 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 AL691482.1-201ENST00000453255 87 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 RN7SL172P-201ENST00000460535 303 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 RN7SL629P-201ENST00000489622 285 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 RN7SL441P-201ENST00000492388 296 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 USP9YP2-201ENST00000504503 1000 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 USP9YP1-201ENST00000513521 1002 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 OR4A46P-201ENST00000527255 933 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AL512310.9-201ENST00000553311 948 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 AC004825.1-201ENST00000555068 586 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AC009852.2-201ENST00000567898 485 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 AP002505.2-201ENST00000623585 696 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 OR52B5P-202ENST00000641118 1110 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 PANDAR-201ENST00000629595 1506 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS1Q01581 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS1Q01581 CDC27P2-201ENST00000425026 1922 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.85□□□□□ -1.63
HMGCS1Q01581 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS1Q01581 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS1Q01581 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS1Q01581 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCS1Q01581 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 CR788268.1-201ENST00000603931 1809 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 AC019072.1-201ENST00000604535 1551 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 RARSP1-201ENST00000542842 1418 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 RNU6-171P-201ENST00000384354 107 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 MIR223-201ENST00000385204 110 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 SNORA77-201ENST00000408716 125 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 RN7SKP126-201ENST00000411143 300 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 AL450023.3-201ENST00000440592 271 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 AC245047.2-201ENST00000441060 530 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms