Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 OR7E157P-201ENST00000494376 911 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 AC121161.1-201ENST00000510606 652 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 AC108471.1-201ENST00000513977 287 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.32□□□□□ -1.56
RPS3AP61247 RNU6-334P-201ENST00000517072 102 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.32□□□□□ -1.56
RPS3AP61247 SOX5P1-201ENST00000524155 1127 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 AP000648.1-201ENST00000529682 397 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.32□□□□□ -1.56
RPS3AP61247 NANOGNBP2-201ENST00000544753 553 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPS3AP61247 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPS3AP61247 AC104229.1-201ENST00000561364 255 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 AC007346.2-201ENST00000564816 892 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.32□□□□□ -1.56
RPS3AP61247 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RPS3AP61247 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.32□□□□□ -1.56
RPS3AP61247 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.32□□□□□ -1.56
RPS3AP61247 AL031601.1-201ENST00000605702 394 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPS3AP61247 AP003497.2-201ENST00000624220 967 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.32□□□□□ -1.56
RPS3AP61247 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPS3AP61247 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RPS3AP61247 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPS3AP61247 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPS3AP61247 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPS3AP61247 GVINP1-202ENST00000531871 7271 ntBASIC5.32□□□□□ -1.56
RPS3AP61247 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPS3AP61247 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 AC008432.1-201ENST00000615912 1320 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RPS3AP61247 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 RPS4XP5-201ENST00000419038 768 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AK4P4-201ENST00000419465 646 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 MTCO2P1-201ENST00000424648 477 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 AC009784.1-201ENST00000426484 460 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.31□□□□□ -1.56
RPS3AP61247 DEFA9P-201ENST00000433042 285 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.31□□□□□ -1.56
RPS3AP61247 AC092685.1-201ENST00000447960 1243 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 AC144530.1-201ENST00000452862 555 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 RPL32P14-201ENST00000463196 378 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AC011476.1-201ENST00000466725 307 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.31□□□□□ -1.56
RPS3AP61247 AC006499.4-201ENST00000510947 694 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AC114781.3-201ENST00000512083 142 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AC133963.2-201ENST00000513686 578 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 snoU109.6-201ENST00000516831 118 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 BUD31P1-201ENST00000521828 359 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 C1DP5-201ENST00000525775 383 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AC090424.1-201ENST00000535243 736 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.31□□□□□ -1.56
RPS3AP61247 SETP1-201ENST00000556014 845 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 RBM22P12-201ENST00000567098 1255 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
RPS3AP61247 AC022884.3-201ENST00000579571 248 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 MIR4260-201ENST00000583107 67 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 AC006115.2-201ENST00000596823 202 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AL513327.3-201ENST00000602618 469 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AC018618.2-201ENST00000604770 446 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AL359513.1-201ENST00000614364 557 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 AL355974.3-201ENST00000617383 467 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 OR8G3P-202ENST00000641572 1255 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 AL353796.1-201ENST00000561542 3241 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPS3AP61247 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
RPS3AP61247 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RPS3AP61247 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms