Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC009237.13-201ENST00000603193 276 ntBASIC6.52□□□□□ -1.37
RHBDL3P58872 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.52□□□□□ -1.37
RHBDL3P58872 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.52□□□□□ -1.37
RHBDL3P58872 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.52□□□□□ -1.37
RHBDL3P58872 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.52□□□□□ -1.37
RHBDL3P58872 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.52□□□□□ -1.37
RHBDL3P58872 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RHBDL3P58872 STX3-208ENST00000641815 3236 ntBASIC6.52□□□□□ -1.37
RHBDL3P58872 TRIM51GP-201ENST00000534741 1350 ntBASIC6.52□□□□□ -1.37
RHBDL3P58872 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RHBDL3P58872 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RHBDL3P58872 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RHBDL3P58872 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RHBDL3P58872 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RHBDL3P58872 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.52□□□□□ -1.37
RHBDL3P58872 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RHBDL3P58872 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RHBDL3P58872 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 AC011493.1-201ENST00000596753 1632 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.51□□□□□ -1.37
RHBDL3P58872 RPL23P2-201ENST00000320371 421 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RHBDL3P58872 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 SNORA74A-201ENST00000364089 198 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 RNU1-106P-201ENST00000384382 164 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 MIR765-201ENST00000390226 114 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 RNU6-244P-201ENST00000391028 104 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.51□□□□□ -1.37
RHBDL3P58872 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.51□□□□□ -1.37
RHBDL3P58872 AL158827.1-201ENST00000416300 391 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.51□□□□□ -1.37
RHBDL3P58872 RPL12P18-201ENST00000437175 325 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 CASP3P1-201ENST00000446037 609 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.51□□□□□ -1.37
RHBDL3P58872 RN7SL329P-201ENST00000467740 299 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 AC004453.1-201ENST00000487895 408 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.51□□□□□ -1.37
RHBDL3P58872 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.51□□□□□ -1.37
RHBDL3P58872 HMGB1P40-201ENST00000525121 540 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.51□□□□□ -1.37
RHBDL3P58872 CR383656.14-201ENST00000551951 406 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.51□□□□□ -1.37
RHBDL3P58872 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 RPSAP73-201ENST00000614820 330 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 AP004607.9-201ENST00000618202 316 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 AP001005.3-201ENST00000622049 129 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 AP002505.2-201ENST00000623585 696 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 OR55B1P-203ENST00000641518 2602 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 OR4F13P-202ENST00000560066 2054 ntBASIC6.51□□□□□ -1.37
RHBDL3P58872 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RHBDL3P58872 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RHBDL3P58872 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RHBDL3P58872 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RHBDL3P58872 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RHBDL3P58872 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RHBDL3P58872 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RHBDL3P58872 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RHBDL3P58872 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RHBDL3P58872 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RHBDL3P58872 RNA5SP507-201ENST00000363603 121 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 SNORA67-201ENST00000384423 137 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 PEX12P1-201ENST00000400284 1048 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 FAM96AP1-201ENST00000430879 482 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AL035458.1-201ENST00000433096 585 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 PSMD10P3-201ENST00000437000 448 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AC092685.1-201ENST00000447960 1243 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AL672138.1-201ENST00000450604 1015 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AL354710.1-201ENST00000453641 246 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 RN7SL610P-201ENST00000463845 291 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.5□□□□□ -1.37
RHBDL3P58872 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.5□□□□□ -1.37
RHBDL3P58872 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.5□□□□□ -1.37
RHBDL3P58872 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.5□□□□□ -1.37
RHBDL3P58872 RNU6-1102P-201ENST00000516149 96 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 RNA5SP373-201ENST00000517271 95 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms