Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 OR2AF1P-201ENST00000454899 889 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AC092691.2-201ENST00000461787 803 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AC092905.1-201ENST00000467527 949 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AC098583.1-201ENST00000480875 255 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN20P56880 AL136038.1-201ENST00000497246 351 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 RN7SL466P-201ENST00000497546 295 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN20P56880 AC010374.2-201ENST00000512933 535 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AC112198.4-201ENST00000515450 351 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 RNU6-334P-201ENST00000517072 102 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN20P56880 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN20P56880 AL512310.9-201ENST00000553311 948 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN20P56880 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 MIR4311-201ENST00000580794 100 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 RN7SL753P-201ENST00000581238 290 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN20P56880 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN20P56880 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 AC097504.2-201ENST00000608088 454 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 AL049767.1-202ENST00000637826 242 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 THAP12P5-201ENST00000405864 2275 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLDN20P56880 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN20P56880 AC104964.3-201ENST00000606115 2860 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN20P56880 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN20P56880 RNU1-136P-201ENST00000384181 164 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 MIR323B-201ENST00000385269 82 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 U3.25-201ENST00000391209 220 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 TAF9BP2-201ENST00000400856 499 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 GAPDHP42-201ENST00000406848 981 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 RPS26P13-201ENST00000419030 330 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 RNGTTP1-201ENST00000420965 728 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AC079355.1-201ENST00000421770 223 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 ELOCP6-201ENST00000429066 328 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 MTCYBP29-201ENST00000436327 1006 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AC012075.1-201ENST00000436549 580 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN20P56880 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 AC083899.1-201ENST00000454465 3819 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 ELOCP12-201ENST00000458706 328 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 ABCC13-202ENST00000463099 3842 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 AC008410.1-201ENST00000483777 339 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 OR11I1P-201ENST00000486033 954 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN20P56880 RPEP1-201ENST00000504507 658 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 C1DP5-201ENST00000525775 383 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 AC137627.1-201ENST00000545761 289 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 AC021483.2-201ENST00000567415 758 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN20P56880 MIR8084-201ENST00000614105 89 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 AC068880.4-201ENST00000623082 495 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms