Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.27□□□□□ -1.57
CDH6P55285 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH6P55285 AL121878.1-201ENST00000418638 859 ntBASIC5.27□□□□□ -1.57
CDH6P55285 AC013429.2-201ENST00000418798 781 ntBASIC5.27□□□□□ -1.57
CDH6P55285 AC104333.2-201ENST00000422630 192 ntBASIC5.27□□□□□ -1.57
CDH6P55285 HMGN2P27-201ENST00000427352 270 ntBASIC5.27□□□□□ -1.57
CDH6P55285 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH6P55285 BX323845.1-201ENST00000432417 179 ntBASIC5.27□□□□□ -1.57
CDH6P55285 OR2AF1P-201ENST00000454899 889 ntBASIC5.27□□□□□ -1.57
CDH6P55285 RPL5P22-201ENST00000480199 884 ntBASIC5.27□□□□□ -1.57
CDH6P55285 COX6B1P2-201ENST00000489624 230 ntBASIC5.27□□□□□ -1.57
CDH6P55285 AC072052.1-201ENST00000496556 306 ntBASIC5.27□□□□□ -1.57
CDH6P55285 MORF4L2P1-201ENST00000503761 858 ntBASIC5.27□□□□□ -1.57
CDH6P55285 HIGD1AP14-201ENST00000507617 282 ntBASIC5.27□□□□□ -1.57
CDH6P55285 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH6P55285 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH6P55285 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH6P55285 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH6P55285 AP000859.1-201ENST00000525536 307 ntBASIC5.27□□□□□ -1.57
CDH6P55285 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH6P55285 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH6P55285 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH6P55285 MIR1269B-201ENST00000580405 75 ntBASIC5.27□□□□□ -1.57
CDH6P55285 RN7SL753P-201ENST00000581238 290 ntBASIC5.27□□□□□ -1.57
CDH6P55285 BX005214.3-202ENST00000619809 325 ntBASIC5.27□□□□□ -1.57
CDH6P55285 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH6P55285 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH6P55285 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CDH6P55285 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH6P55285 AC008079.2-201ENST00000623543 20396 ntBASIC5.27□□□□□ -1.57
CDH6P55285 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH6P55285 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH6P55285 AC083843.2-201ENST00000568248 6253 ntBASIC5.27□□□□□ -1.57
CDH6P55285 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH6P55285 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
CDH6P55285 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH6P55285 AC100778.3-201ENST00000580060 1750 ntBASIC5.27□□□□□ -1.57
CDH6P55285 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH6P55285 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH6P55285 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH6P55285 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH6P55285 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH6P55285 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH6P55285 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH6P55285 SOCS5P3-201ENST00000425115 1576 ntBASIC5.26□□□□□ -1.57
CDH6P55285 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH6P55285 AC017079.1-201ENST00000333650 415 ntBASIC5.26□□□□□ -1.57
CDH6P55285 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDH6P55285 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH6P55285 AL356968.2-201ENST00000412769 1257 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AC007738.1-201ENST00000413892 348 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AL355433.1-201ENST00000422804 300 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AC244033.1-201ENST00000426826 870 ntBASIC5.26□□□□□ -1.57
CDH6P55285 CNOT7P2-201ENST00000441051 832 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH6P55285 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH6P55285 RN7SL222P-201ENST00000476452 299 ntBASIC5.26□□□□□ -1.57
CDH6P55285 RN7SL441P-201ENST00000492388 296 ntBASIC5.26□□□□□ -1.57
CDH6P55285 SNRPCP2-201ENST00000504370 475 ntBASIC5.26□□□□□ -1.57
CDH6P55285 RNU6-943P-201ENST00000516960 98 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AC105031.1-201ENST00000518550 476 ntBASIC5.26□□□□□ -1.57
CDH6P55285 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AP002373.2-201ENST00000541631 1060 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AC090022.1-201ENST00000546569 311 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AL390334.1-201ENST00000556395 450 ntBASIC5.26□□□□□ -1.57
CDH6P55285 AC009852.2-201ENST00000567898 485 ntBASIC5.26□□□□□ -1.57
CDH6P55285 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH6P55285 AC099494.2-201ENST00000623371 978 ntBASIC5.26□□□□□ -1.57
CDH6P55285 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH6P55285 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
CDH6P55285 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
CDH6P55285 AL590763.1-201ENST00000398297 1545 ntBASIC5.26□□□□□ -1.57
CDH6P55285 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
CDH6P55285 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CDH6P55285 CIR1P2-201ENST00000514821 1342 ntBASIC5.25□□□□□ -1.57
CDH6P55285 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CDH6P55285 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH6P55285 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 MTCO1P15-201ENST00000529569 1526 ntBASIC5.25□□□□□ -1.57
CDH6P55285 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH6P55285 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
CDH6P55285 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
CDH6P55285 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AC211486.3-201ENST00000412694 621 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AL034379.1-201ENST00000423216 253 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH6P55285 TXNP5-201ENST00000441043 315 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH6P55285 MRPL35P2-201ENST00000448009 511 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AC092647.2-201ENST00000452998 253 ntBASIC5.25□□□□□ -1.57
CDH6P55285 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH6P55285 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH6P55285 AC022832.1-201ENST00000530718 645 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH6P55285 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH6P55285 AL512310.9-201ENST00000553311 948 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms