Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
PMS1P54277 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PMS1P54277 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PMS1P54277 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
PMS1P54277 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PMS1P54277 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PMS1P54277 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 Y_RNA.192-201ENST00000363977 102 ntBASIC6.71□□□□□ -1.34
PMS1P54277 RNU4-31P-201ENST00000384211 141 ntBASIC6.71□□□□□ -1.34
PMS1P54277 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
PMS1P54277 AL035419.1-201ENST00000397037 564 ntBASIC6.71□□□□□ -1.34
PMS1P54277 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 CBX1P3-201ENST00000413296 527 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 HSPE1P16-201ENST00000426640 348 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.71□□□□□ -1.34
PMS1P54277 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.71□□□□□ -1.34
PMS1P54277 IGLV3-4-201ENST00000432300 244 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.71□□□□□ -1.34
PMS1P54277 AC002542.1-201ENST00000440683 193 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AC015983.1-201ENST00000441577 373 ntBASIC6.71□□□□□ -1.34
PMS1P54277 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.71□□□□□ -1.34
PMS1P54277 AL162739.1-201ENST00000450606 307 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.71□□□□□ -1.34
PMS1P54277 SNRPCP11-201ENST00000492453 205 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AC106822.1-201ENST00000502647 526 ntBASIC6.71□□□□□ -1.34
PMS1P54277 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.71□□□□□ -1.34
PMS1P54277 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 AC020937.1-201ENST00000519677 1013 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AC116917.1-201ENST00000520558 305 ntBASIC6.71□□□□□ -1.34
PMS1P54277 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.71□□□□□ -1.34
PMS1P54277 AL121766.1-201ENST00000547436 487 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AGGF1P7-201ENST00000562369 913 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.71□□□□□ -1.34
PMS1P54277 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.71□□□□□ -1.34
PMS1P54277 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 AC006539.2-201ENST00000601729 572 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AL583832.1-201ENST00000603227 784 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AC015819.1-201ENST00000613588 663 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AP003072.4-201ENST00000624580 310 ntBASIC6.71□□□□□ -1.34
PMS1P54277 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.71□□□□□ -1.34
PMS1P54277 AC007603.3-201ENST00000636915 979 ntBASIC6.71□□□□□ -1.34
PMS1P54277 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.34
PMS1P54277 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 AC016583.1-201ENST00000624221 2431 ntBASIC6.71□□□□□ -1.34
PMS1P54277 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
PMS1P54277 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PMS1P54277 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.7□□□□□ -1.34
PMS1P54277 AL669831.5-218ENST00000591702 1873 ntBASIC6.7□□□□□ -1.34
PMS1P54277 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PMS1P54277 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.7□□□□□ -1.34
PMS1P54277 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PMS1P54277 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.7□□□□□ -1.34
PMS1P54277 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PMS1P54277 AP000547.3-204ENST00000588548 2523 ntBASIC6.7□□□□□ -1.34
PMS1P54277 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.7□□□□□ -1.34
PMS1P54277 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PMS1P54277 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PMS1P54277 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PMS1P54277 AC004022.2-201ENST00000413824 193 ntBASIC6.7□□□□□ -1.34
PMS1P54277 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.7□□□□□ -1.34
PMS1P54277 RPL7AP51-201ENST00000422016 760 ntBASIC6.7□□□□□ -1.34
PMS1P54277 AC093084.1-201ENST00000424233 687 ntBASIC6.7□□□□□ -1.34
PMS1P54277 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.7□□□□□ -1.34
PMS1P54277 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PMS1P54277 AC093716.1-201ENST00000435923 377 ntBASIC6.7□□□□□ -1.34
PMS1P54277 RPL23AP60-201ENST00000450011 454 ntBASIC6.7□□□□□ -1.34
PMS1P54277 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.7□□□□□ -1.34
PMS1P54277 VN1R32P-201ENST00000452234 905 ntBASIC6.7□□□□□ -1.34
PMS1P54277 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PMS1P54277 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.7□□□□□ -1.34
PMS1P54277 RPS27AP2-201ENST00000457576 465 ntBASIC6.7□□□□□ -1.34
PMS1P54277 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.7□□□□□ -1.34
PMS1P54277 RPL5P12-201ENST00000477071 851 ntBASIC6.7□□□□□ -1.34
PMS1P54277 RPL23AP37-201ENST00000479658 549 ntBASIC6.7□□□□□ -1.34
PMS1P54277 AC104971.1-201ENST00000495117 578 ntBASIC6.7□□□□□ -1.34
PMS1P54277 AC092045.1-201ENST00000495716 1231 ntBASIC6.7□□□□□ -1.34
PMS1P54277 CDH12P2-201ENST00000504393 298 ntBASIC6.7□□□□□ -1.34
PMS1P54277 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.7□□□□□ -1.34
PMS1P54277 AC008885.2-201ENST00000509506 930 ntBASIC6.7□□□□□ -1.34
PMS1P54277 AC116353.3-201ENST00000511215 249 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms