Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
GPC3P51654 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 SNURFL-201ENST00000309296 343 ntBASIC5.76□□□□□ -1.49
GPC3P51654 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
GPC3P51654 MIR550A3-201ENST00000390735 95 ntBASIC5.76□□□□□ -1.49
GPC3P51654 RNU6-1320P-201ENST00000390838 107 ntBASIC5.76□□□□□ -1.49
GPC3P51654 RNU6-1269P-201ENST00000391139 107 ntBASIC5.76□□□□□ -1.49
GPC3P51654 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 OR6C71P-201ENST00000432580 913 ntBASIC5.76□□□□□ -1.49
GPC3P51654 RPL19P16-201ENST00000433839 588 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.76□□□□□ -1.49
GPC3P51654 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.76□□□□□ -1.49
GPC3P51654 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.76□□□□□ -1.49
GPC3P51654 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.76□□□□□ -1.49
GPC3P51654 RNU6-599P-201ENST00000459383 107 ntBASIC5.76□□□□□ -1.49
GPC3P51654 RNU6-1193P-201ENST00000459461 107 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AC097484.1-201ENST00000471148 389 ntBASIC5.76□□□□□ -1.49
GPC3P51654 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 NDUFB5P1-201ENST00000508134 564 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AC004980.4-201ENST00000513375 203 ntBASIC5.76□□□□□ -1.49
GPC3P51654 RN7SKP147-201ENST00000517154 244 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AC092709.1-201ENST00000521355 1045 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AP000859.1-201ENST00000525536 307 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.76□□□□□ -1.49
GPC3P51654 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.76□□□□□ -1.49
GPC3P51654 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.76□□□□□ -1.49
GPC3P51654 OR1F2P-201ENST00000570470 933 ntBASIC5.76□□□□□ -1.49
GPC3P51654 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 AC008814.1-201ENST00000603797 406 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AL162431.4-201ENST00000604674 411 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 RNU6-368P-201ENST00000620928 107 ntBASIC5.76□□□□□ -1.49
GPC3P51654 RNU6-538P-201ENST00000622329 107 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AC138965.3-201ENST00000623875 498 ntBASIC5.76□□□□□ -1.49
GPC3P51654 AC135068.12-201ENST00000637370 931 ntBASIC5.76□□□□□ -1.49
GPC3P51654 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.76□□□□□ -1.49
GPC3P51654 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
GPC3P51654 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
GPC3P51654 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GPC3P51654 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
GPC3P51654 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GPC3P51654 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GPC3P51654 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
GPC3P51654 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
GPC3P51654 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 RNA5SP90-201ENST00000364801 99 ntBASIC5.75□□□□□ -1.49
GPC3P51654 OR13C3-201ENST00000374781 1108 ntBASIC5.75□□□□□ -1.49
GPC3P51654 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GPC3P51654 RBMY2QP-201ENST00000429799 1147 ntBASIC5.75□□□□□ -1.49
GPC3P51654 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 AL645937.3-201ENST00000453647 936 ntBASIC5.75□□□□□ -1.49
GPC3P51654 DNAJB5P1-201ENST00000454004 806 ntBASIC5.75□□□□□ -1.49
GPC3P51654 AC113398.2-201ENST00000507630 558 ntBASIC5.75□□□□□ -1.49
GPC3P51654 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.75□□□□□ -1.49
GPC3P51654 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.75□□□□□ -1.49
GPC3P51654 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 RN7SL290P-201ENST00000578661 300 ntBASIC5.75□□□□□ -1.49
GPC3P51654 AP005212.4-201ENST00000614206 710 ntBASIC5.75□□□□□ -1.49
GPC3P51654 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.75□□□□□ -1.49
GPC3P51654 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GPC3P51654 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
GPC3P51654 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.75□□□□□ -1.49
GPC3P51654 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 AC023421.1-201ENST00000590535 1785 ntBASIC5.75□□□□□ -1.49
GPC3P51654 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.75□□□□□ -1.49
GPC3P51654 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC3P51654 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GPC3P51654 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.74□□□□□ -1.49
GPC3P51654 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.74□□□□□ -1.49
GPC3P51654 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GPC3P51654 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
GPC3P51654 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GPC3P51654 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms