Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.6□□□□□ -1.51
SSR1P43307 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 AC027279.1-201ENST00000568885 4284 ntBASIC5.6□□□□□ -1.51
SSR1P43307 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSR1P43307 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.6□□□□□ -1.51
SSR1P43307 RNU6-984P-201ENST00000363236 109 ntBASIC5.6□□□□□ -1.51
SSR1P43307 MIR105-1-201ENST00000385222 81 ntBASIC5.6□□□□□ -1.51
SSR1P43307 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 Z68694.1-201ENST00000413929 841 ntBASIC5.6□□□□□ -1.51
SSR1P43307 SDHDP6-201ENST00000414693 480 ntBASIC5.6□□□□□ -1.51
SSR1P43307 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.6□□□□□ -1.51
SSR1P43307 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.6□□□□□ -1.51
SSR1P43307 AC002069.1-201ENST00000429649 1159 ntBASIC5.6□□□□□ -1.51
SSR1P43307 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.6□□□□□ -1.51
SSR1P43307 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.6□□□□□ -1.51
SSR1P43307 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.6□□□□□ -1.51
SSR1P43307 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SSR1P43307 AC017007.3-201ENST00000479865 435 ntBASIC5.6□□□□□ -1.51
SSR1P43307 AC090638.1-201ENST00000498296 909 ntBASIC5.6□□□□□ -1.51
SSR1P43307 KATNBL1P4-201ENST00000503545 918 ntBASIC5.6□□□□□ -1.51
SSR1P43307 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.6□□□□□ -1.51
SSR1P43307 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.6□□□□□ -1.51
SSR1P43307 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 AC100784.1-201ENST00000522790 310 ntBASIC5.6□□□□□ -1.51
SSR1P43307 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.6□□□□□ -1.51
SSR1P43307 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.6□□□□□ -1.51
SSR1P43307 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.6□□□□□ -1.51
SSR1P43307 AC015720.2-201ENST00000567709 334 ntBASIC5.6□□□□□ -1.51
SSR1P43307 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.6□□□□□ -1.51
SSR1P43307 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.6□□□□□ -1.51
SSR1P43307 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.6□□□□□ -1.51
SSR1P43307 AL691477.1-201ENST00000624398 162 ntBASIC5.6□□□□□ -1.51
SSR1P43307 SAMMSON-209ENST00000641222 1100 ntBASIC5.6□□□□□ -1.51
SSR1P43307 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.6□□□□□ -1.51
SSR1P43307 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSR1P43307 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.59□□□□□ -1.51
SSR1P43307 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SSR1P43307 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
SSR1P43307 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.59□□□□□ -1.51
SSR1P43307 AL731532.2-201ENST00000623542 1953 ntBASIC5.59□□□□□ -1.51
SSR1P43307 OR9G4-201ENST00000302957 984 ntBASIC5.59□□□□□ -1.51
SSR1P43307 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSR1P43307 RNU6-1263P-201ENST00000384601 106 ntBASIC5.59□□□□□ -1.51
SSR1P43307 MIR708-201ENST00000390708 88 ntBASIC5.59□□□□□ -1.51
SSR1P43307 MIR1282-201ENST00000408865 101 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.59□□□□□ -1.51
SSR1P43307 AC010740.1-201ENST00000417035 684 ntBASIC5.59□□□□□ -1.51
SSR1P43307 VN1R3-201ENST00000418822 919 ntBASIC5.59□□□□□ -1.51
SSR1P43307 RPS12P5-201ENST00000423449 371 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.59□□□□□ -1.51
SSR1P43307 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.59□□□□□ -1.51
SSR1P43307 AL161636.2-201ENST00000445179 927 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC090804.1-201ENST00000448870 490 ntBASIC5.59□□□□□ -1.51
SSR1P43307 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.59□□□□□ -1.51
SSR1P43307 OR52E3P-201ENST00000452083 936 ntBASIC5.59□□□□□ -1.51
SSR1P43307 RANP1-206ENST00000455094 651 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC058823.1-201ENST00000485315 474 ntBASIC5.59□□□□□ -1.51
SSR1P43307 RPS12P31-201ENST00000491419 398 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC111000.5-201ENST00000506559 1178 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.59□□□□□ -1.51
SSR1P43307 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.59□□□□□ -1.51
SSR1P43307 RN7SKP5-201ENST00000517045 272 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.59□□□□□ -1.51
SSR1P43307 AC011270.1-201ENST00000558606 583 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.59□□□□□ -1.51
SSR1P43307 MIR1273E-201ENST00000581165 102 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC015982.1-201ENST00000608113 465 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC000068.2-201ENST00000608816 460 ntBASIC5.59□□□□□ -1.51
SSR1P43307 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 AL158196.1-201ENST00000616786 434 ntBASIC5.59□□□□□ -1.51
SSR1P43307 MIR6861-201ENST00000618657 64 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC127024.6-201ENST00000621598 424 ntBASIC5.59□□□□□ -1.51
SSR1P43307 AC091932.2-201ENST00000623014 291 ntBASIC5.59□□□□□ -1.51
SSR1P43307 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.59□□□□□ -1.51
SSR1P43307 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.59□□□□□ -1.51
SSR1P43307 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSR1P43307 AL133243.3-201ENST00000617415 3004 ntBASIC5.59□□□□□ -1.51
SSR1P43307 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SSR1P43307 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SSR1P43307 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.59□□□□□ -1.51
SSR1P43307 MAPK10-304ENST00000641341 3984 ntBASIC5.59□□□□□ -1.51
SSR1P43307 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
SSR1P43307 AL445487.1-201ENST00000415694 1580 ntBASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms