Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA3P32297 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHRNA3P32297 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.49□□□□□ -1.53
CHRNA3P32297 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 RNA5SP223-201ENST00000365174 120 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHRNA3P32297 MIR223-201ENST00000385204 110 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 RNA5SP339-201ENST00000390987 122 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 AL121878.1-201ENST00000418638 859 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.49□□□□□ -1.53
CHRNA3P32297 FAM96AP1-201ENST00000430879 482 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.49□□□□□ -1.53
CHRNA3P32297 GTF3AP5-201ENST00000442645 697 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 RBMY2TP-201ENST00000451162 947 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 MTND6P32-201ENST00000457611 483 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 RN7SL172P-201ENST00000460535 303 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.49□□□□□ -1.53
CHRNA3P32297 RN7SL423P-201ENST00000486202 304 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 HIGD1AP14-201ENST00000507617 282 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA3P32297 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.49□□□□□ -1.53
CHRNA3P32297 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA3P32297 RNA5SP92-201ENST00000516437 110 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.49□□□□□ -1.53
CHRNA3P32297 OR8A2P-201ENST00000528631 952 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.49□□□□□ -1.53
CHRNA3P32297 AC016180.1-201ENST00000567945 403 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.49□□□□□ -1.53
CHRNA3P32297 RN7SL708P-201ENST00000580952 299 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.49□□□□□ -1.53
CHRNA3P32297 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA3P32297 BX005214.3-202ENST00000619809 325 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 AC074101.1-201ENST00000637861 241 ntBASIC5.49□□□□□ -1.53
CHRNA3P32297 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHRNA3P32297 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA3P32297 MTCO1P15-201ENST00000529569 1526 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
CHRNA3P32297 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CHRNA3P32297 C4BPAP1-201ENST00000415474 1893 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.48□□□□□ -1.53
CHRNA3P32297 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CHRNA3P32297 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 RN7SKP16-201ENST00000410180 299 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.48□□□□□ -1.53
CHRNA3P32297 NANOGP4-201ENST00000427230 913 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 AL627308.1-201ENST00000435693 821 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 GAPDHP25-201ENST00000447061 1001 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.48□□□□□ -1.53
CHRNA3P32297 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 AC023424.1-201ENST00000496058 459 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 AP000859.1-201ENST00000525536 307 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CHRNA3P32297 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.48□□□□□ -1.53
CHRNA3P32297 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.48□□□□□ -1.53
CHRNA3P32297 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA3P32297 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CHRNA3P32297 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA3P32297 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.48□□□□□ -1.53
CHRNA3P32297 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 AC005252.1-201ENST00000604518 1063 ntBASIC5.48□□□□□ -1.53
CHRNA3P32297 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.48□□□□□ -1.53
CHRNA3P32297 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA3P32297 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA3P32297 AC097461.1-201ENST00000568928 2821 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.47□□□□□ -1.53
CHRNA3P32297 AL731532.2-201ENST00000623542 1953 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA3P32297 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA3P32297 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA3P32297 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA3P32297 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CHRNA3P32297 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CHRNA3P32297 RNU4-34P-201ENST00000410431 124 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.47□□□□□ -1.53
CHRNA3P32297 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.47□□□□□ -1.53
CHRNA3P32297 OR52B5P-201ENST00000435337 951 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 CNOT7P2-201ENST00000441051 832 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA3P32297 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.47□□□□□ -1.53
CHRNA3P32297 RPS11P7-201ENST00000442125 465 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA3P32297 MTND4LP12-201ENST00000448237 295 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA3P32297 RN7SL189P-201ENST00000468631 289 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms