Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC010285.3-201ENST00000511668 676 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 RN7SKP31-201ENST00000516354 278 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC12P31275 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC12P31275 OR5AK1P-201ENST00000524837 922 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC027026.1-201ENST00000532323 742 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 NXPE2P1-201ENST00000543705 726 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC121758.1-202ENST00000556917 658 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC087241.4-201ENST00000612441 480 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AC012676.3-201ENST00000614983 479 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC12P31275 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AC073348.1-201ENST00000623002 331 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXC12P31275 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC005225.5-201ENST00000623547 2225 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC12P31275 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC12P31275 AC011008.2-201ENST00000624866 3352 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC12P31275 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HOXC12P31275 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXC12P31275 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC12P31275 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HOXC12P31275 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC12P31275 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC12P31275 RNA5SP152-201ENST00000365184 110 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 RNA5SP176-201ENST00000390956 110 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AL391419.1-201ENST00000398901 1275 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 Y_RNA.604-201ENST00000410574 102 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 PIGPP2-201ENST00000411569 458 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AC007899.1-201ENST00000412776 775 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 CYCSP46-201ENST00000423569 204 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 AC079807.1-201ENST00000429993 481 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 MTND4P18-201ENST00000447010 465 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AL034418.1-201ENST00000448675 860 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AC144530.1-201ENST00000452862 555 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 AC118758.1-202ENST00000454719 225 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 RN7SL170P-201ENST00000487098 295 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC12P31275 AC122718.2-201ENST00000505325 591 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 PABPC1P1-201ENST00000506347 591 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC12P31275 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 AC109471.1-201ENST00000511631 612 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXC12P31275 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 MTND4LP26-201ENST00000518144 282 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 EEF1B2P2-201ENST00000519625 676 ntBASIC6.07□□□□□ -1.44
HOXC12P31275 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC12P31275 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC12P31275 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC12P31275 MTND1P15-201ENST00000579262 949 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms