Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC3P19447 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
ERCC3P19447 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
ERCC3P19447 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC3P19447 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC3P19447 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC3P19447 IL6STP1-201ENST00000346911 1020 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AL451142.1-201ENST00000375867 775 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC3P19447 RSL24D1P4-201ENST00000400938 484 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AL021407.1-201ENST00000404531 386 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 AC004074.1-201ENST00000421810 1063 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 AL035407.1-201ENST00000429211 571 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 FTLP19-201ENST00000433300 394 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 RPS7P5-201ENST00000441482 581 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AL591503.2-201ENST00000442314 1005 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.4□□□□□ -1.22
ERCC3P19447 RPL23AP64-201ENST00000469465 435 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 RPL7P18-201ENST00000478965 734 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 RN7SL561P-201ENST00000488553 281 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 OR7E99P-201ENST00000505750 922 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC3P19447 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 AC018442.3-201ENST00000523025 183 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC3P19447 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC3P19447 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.4□□□□□ -1.22
ERCC3P19447 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC3P19447 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.4□□□□□ -1.22
ERCC3P19447 CYCSP38-201ENST00000559840 322 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 AC090751.1-201ENST00000566966 267 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC3P19447 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 MIR4701-201ENST00000583094 63 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC3P19447 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC3P19447 VN1R82P-201ENST00000601481 356 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AL590229.1-201ENST00000603497 542 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 BUB1P1-201ENST00000603541 607 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC131235.4-201ENST00000609288 620 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AL080312.2-201ENST00000613001 630 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC012254.5-201ENST00000623573 478 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.4□□□□□ -1.22
ERCC3P19447 AF246928.1-201ENST00000623768 87 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC3P19447 AC098679.4-201ENST00000624241 654 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC3P19447 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC3P19447 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC3P19447 MTCO1P7-201ENST00000419523 1542 ntBASIC7.4□□□□□ -1.22
ERCC3P19447 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.4□□□□□ -1.22
ERCC3P19447 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
ERCC3P19447 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.4□□□□□ -1.23
ERCC3P19447 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.4□□□□□ -1.23
ERCC3P19447 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
ERCC3P19447 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.4□□□□□ -1.23
ERCC3P19447 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
ERCC3P19447 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
ERCC3P19447 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC3P19447 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.39□□□□□ -1.23
ERCC3P19447 AL139384.2-201ENST00000613809 3590 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.39□□□□□ -1.23
ERCC3P19447 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC3P19447 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC3P19447 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC3P19447 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.39□□□□□ -1.23
ERCC3P19447 AC020633.1-201ENST00000468439 2247 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC3P19447 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC3P19447 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC3P19447 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC3P19447 SGO1P1-201ENST00000603525 1447 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 RBPJP2-201ENST00000618187 1444 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 AC119674.1-204ENST00000641348 1343 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC3P19447 RNU6-225P-201ENST00000384613 103 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 QRSL1P2-201ENST00000418582 964 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC3P19447 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.39□□□□□ -1.23
ERCC3P19447 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.39□□□□□ -1.23
ERCC3P19447 AC009784.1-201ENST00000426484 460 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC7.39□□□□□ -1.23
ERCC3P19447 MTCO1P54-201ENST00000430139 712 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.39□□□□□ -1.23
ERCC3P19447 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.39□□□□□ -1.23
ERCC3P19447 AC093155.1-201ENST00000440164 826 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
ERCC3P19447 RPS27AP8-201ENST00000452665 445 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.39□□□□□ -1.23
ERCC3P19447 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.39□□□□□ -1.23
ERCC3P19447 OR2A20P-203ENST00000498397 1268 ntBASIC7.39□□□□□ -1.23
ERCC3P19447 AC109445.1-201ENST00000512356 383 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms