Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AGGF1P8-201ENST00000562979 1000 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC6.04□□□□□ -1.44
ATF4P18848 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.04□□□□□ -1.44
ATF4P18848 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 RPL23AP77-201ENST00000588044 463 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 AC009237.13-201ENST00000603193 276 ntBASIC6.04□□□□□ -1.44
ATF4P18848 MIR7162-201ENST00000611134 69 ntBASIC6.04□□□□□ -1.44
ATF4P18848 U6.101-201ENST00000637707 76 ntBASIC6.04□□□□□ -1.44
ATF4P18848 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.04□□□□□ -1.44
ATF4P18848 AC022306.1-201ENST00000560489 1562 ntBASIC6.04□□□□□ -1.44
ATF4P18848 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ATF4P18848 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ATF4P18848 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.04□□□□□ -1.44
ATF4P18848 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.04□□□□□ -1.44
ATF4P18848 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATF4P18848 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATF4P18848 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 DDX50P1-201ENST00000438163 2400 ntBASIC6.03□□□□□ -1.44
ATF4P18848 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATF4P18848 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 U8.14-201ENST00000390843 143 ntBASIC6.03□□□□□ -1.44
ATF4P18848 RPS3AP23-201ENST00000401762 784 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AL117344.1-201ENST00000407196 616 ntBASIC6.03□□□□□ -1.44
ATF4P18848 RPL31P52-201ENST00000407532 367 ntBASIC6.03□□□□□ -1.44
ATF4P18848 PPIAP30-201ENST00000415473 519 ntBASIC6.03□□□□□ -1.44
ATF4P18848 GNAI2P2-201ENST00000417003 916 ntBASIC6.03□□□□□ -1.44
ATF4P18848 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 OFD1P18Y-201ENST00000420889 959 ntBASIC6.03□□□□□ -1.44
ATF4P18848 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.03□□□□□ -1.44
ATF4P18848 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 AC010975.2-201ENST00000427781 588 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 AC068137.1-201ENST00000429272 584 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATF4P18848 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.03□□□□□ -1.44
ATF4P18848 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATF4P18848 AL596266.1-201ENST00000448132 400 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.03□□□□□ -1.44
ATF4P18848 AC093899.1-201ENST00000457984 376 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 RPL7P22-201ENST00000466005 733 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AL122013.1-201ENST00000473054 801 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC087879.1-201ENST00000474343 374 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATF4P18848 AL031073.1-201ENST00000503029 1139 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 FTH1P24-201ENST00000503502 462 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC023794.3-204ENST00000510754 236 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AF131216.2-201ENST00000512316 564 ntBASIC6.03□□□□□ -1.44
ATF4P18848 RN7SKP67-201ENST00000515905 235 ntBASIC6.03□□□□□ -1.44
ATF4P18848 PIGFP1-201ENST00000519180 653 ntBASIC6.03□□□□□ -1.44
ATF4P18848 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 AC013828.2-201ENST00000532487 235 ntBASIC6.03□□□□□ -1.44
ATF4P18848 OR8G3P-201ENST00000533406 921 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 TUBAP4-201ENST00000569261 416 ntBASIC6.03□□□□□ -1.44
ATF4P18848 MRPL45P2-203ENST00000573318 473 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 AL133338.2-201ENST00000604292 736 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AP000436.1-201ENST00000605239 800 ntBASIC6.03□□□□□ -1.44
ATF4P18848 RN7SL760P-201ENST00000607344 270 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC006566.1-201ENST00000608943 513 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.03□□□□□ -1.44
ATF4P18848 AC138749.5-201ENST00000611461 208 ntBASIC6.03□□□□□ -1.44
ATF4P18848 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.03□□□□□ -1.44
ATF4P18848 AC114546.4-201ENST00000624413 369 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AL160394.1-201ENST00000624765 724 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AC073488.5-201ENST00000631993 754 ntBASIC6.03□□□□□ -1.44
ATF4P18848 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.03□□□□□ -1.44
ATF4P18848 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms