Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC022336.1-201ENST00000475510 337 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.8□□□□□ -1.64
NCK1P16333 AC090686.1-201ENST00000481577 749 ntBASIC4.8□□□□□ -1.64
NCK1P16333 RN7SL741P-201ENST00000482473 289 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AC073073.1-201ENST00000493920 463 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AL117692.1-201ENST00000494283 713 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.8□□□□□ -1.64
NCK1P16333 HMGB1P40-201ENST00000525121 540 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.8□□□□□ -1.64
NCK1P16333 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NCK1P16333 RPL10P14-201ENST00000565265 298 ntBASIC4.8□□□□□ -1.64
NCK1P16333 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.8□□□□□ -1.64
NCK1P16333 MIR4675-201ENST00000577898 77 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.8□□□□□ -1.64
NCK1P16333 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.8□□□□□ -1.64
NCK1P16333 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.8□□□□□ -1.64
NCK1P16333 AC103703.1-201ENST00000634783 663 ntBASIC4.8□□□□□ -1.64
NCK1P16333 SAMMSON-213ENST00000641336 1521 ntBASIC4.8□□□□□ -1.64
NCK1P16333 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
NCK1P16333 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.8□□□□□ -1.64
NCK1P16333 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NCK1P16333 SCARNA15-201ENST00000607520 4325 ntBASIC4.8□□□□□ -1.64
NCK1P16333 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.8□□□□□ -1.64
NCK1P16333 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.8□□□□□ -1.64
NCK1P16333 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCK1P16333 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
NCK1P16333 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCK1P16333 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCK1P16333 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NCK1P16333 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NCK1P16333 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCK1P16333 MT-RNR1-201ENST00000389680 954 ntBASIC4.79□□□□□ -1.64
NCK1P16333 AC005522.1-201ENST00000395416 346 ntBASIC4.79□□□□□ -1.64
NCK1P16333 AL359643.1-201ENST00000404109 423 ntBASIC4.79□□□□□ -1.64
NCK1P16333 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.79□□□□□ -1.64
NCK1P16333 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.79□□□□□ -1.64
NCK1P16333 BMS1P17-202ENST00000416720 316 ntBASIC4.79□□□□□ -1.64
NCK1P16333 RCC2P2-201ENST00000422174 918 ntBASIC4.79□□□□□ -1.64
NCK1P16333 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.79□□□□□ -1.64
NCK1P16333 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.79□□□□□ -1.64
NCK1P16333 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.79□□□□□ -1.64
NCK1P16333 MTND4LP12-201ENST00000448237 295 ntBASIC4.79□□□□□ -1.64
NCK1P16333 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.79□□□□□ -1.64
NCK1P16333 OR52E7P-201ENST00000452394 933 ntBASIC4.79□□□□□ -1.64
NCK1P16333 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.79□□□□□ -1.64
NCK1P16333 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.79□□□□□ -1.64
NCK1P16333 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.79□□□□□ -1.64
NCK1P16333 RPL23AP53-201ENST00000521854 457 ntBASIC4.79□□□□□ -1.64
NCK1P16333 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.79□□□□□ -1.64
NCK1P16333 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.79□□□□□ -1.64
NCK1P16333 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.79□□□□□ -1.64
NCK1P16333 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.79□□□□□ -1.64
NCK1P16333 NDUFB4P11-201ENST00000560510 395 ntBASIC4.79□□□□□ -1.64
NCK1P16333 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.79□□□□□ -1.64
NCK1P16333 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.79□□□□□ -1.64
NCK1P16333 AC015922.4-201ENST00000612568 690 ntBASIC4.79□□□□□ -1.64
NCK1P16333 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCK1P16333 NEAT1-202ENST00000501122 22743 ntBASIC4.79□□□□□ -1.64
NCK1P16333 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCK1P16333 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCK1P16333 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NCK1P16333 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NCK1P16333 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NCK1P16333 OR13C1P-202ENST00000641378 2919 ntBASIC4.79□□□□□ -1.64
NCK1P16333 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCK1P16333 CASC19-221ENST00000641309 1382 ntBASIC4.78□□□□□ -1.64
NCK1P16333 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.78□□□□□ -1.64
NCK1P16333 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCK1P16333 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NCK1P16333 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NCK1P16333 AC068446.1-201ENST00000556425 1549 ntBASIC4.78□□□□□ -1.64
NCK1P16333 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.78□□□□□ -1.64
NCK1P16333 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCK1P16333 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NCK1P16333 RNA5SP319-201ENST00000362768 119 ntBASIC4.78□□□□□ -1.64
NCK1P16333 SNORA2.3-201ENST00000383920 135 ntBASIC4.78□□□□□ -1.64
NCK1P16333 RNA5SP122-201ENST00000384457 108 ntBASIC4.78□□□□□ -1.64
NCK1P16333 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NCK1P16333 OR7E156P-201ENST00000400303 464 ntBASIC4.78□□□□□ -1.64
NCK1P16333 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.78□□□□□ -1.64
NCK1P16333 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.78□□□□□ -1.64
NCK1P16333 DNAJA1P5-201ENST00000440278 943 ntBASIC4.78□□□□□ -1.64
NCK1P16333 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.78□□□□□ -1.64
NCK1P16333 GYG1P1-201ENST00000460864 698 ntBASIC4.78□□□□□ -1.64
NCK1P16333 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.78□□□□□ -1.64
NCK1P16333 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.78□□□□□ -1.64
NCK1P16333 PSMA2P2-201ENST00000504319 686 ntBASIC4.78□□□□□ -1.64
NCK1P16333 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCK1P16333 AC138938.1-201ENST00000515431 782 ntBASIC4.78□□□□□ -1.64
NCK1P16333 RPS27AP18-201ENST00000515536 459 ntBASIC4.78□□□□□ -1.64
NCK1P16333 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.78□□□□□ -1.64
NCK1P16333 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.78□□□□□ -1.64
NCK1P16333 CD24P2-201ENST00000565486 219 ntBASIC4.78□□□□□ -1.64
NCK1P16333 CYCSP40-201ENST00000575927 294 ntBASIC4.78□□□□□ -1.64
NCK1P16333 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.78□□□□□ -1.64
NCK1P16333 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.78□□□□□ -1.64
NCK1P16333 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.78□□□□□ -1.64
NCK1P16333 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms