Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.54□□□□□ -1.68
FREM3P0C091 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.54□□□□□ -1.68
FREM3P0C091 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FREM3P0C091 AL133270.1-201ENST00000402635 279 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 PCNPP4-201ENST00000414817 517 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.54□□□□□ -1.68
FREM3P0C091 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.54□□□□□ -1.68
FREM3P0C091 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.54□□□□□ -1.68
FREM3P0C091 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.54□□□□□ -1.68
FREM3P0C091 NDUFA5P8-201ENST00000449019 346 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.54□□□□□ -1.68
FREM3P0C091 AC093720.1-201ENST00000505681 714 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.54□□□□□ -1.68
FREM3P0C091 MIR3934-201ENST00000579806 107 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.54□□□□□ -1.68
FREM3P0C091 AC105254.2-201ENST00000603636 436 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 AC087283.1-201ENST00000604029 1074 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.53□□□□□ -1.68
FREM3P0C091 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 AL390316.1-201ENST00000406279 553 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.53□□□□□ -1.68
FREM3P0C091 RPL12P43-201ENST00000420608 499 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 OR2B7P-201ENST00000429302 934 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.53□□□□□ -1.68
FREM3P0C091 MYL12BP2-201ENST00000503948 512 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.53□□□□□ -1.68
FREM3P0C091 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.53□□□□□ -1.68
FREM3P0C091 AC097173.1-201ENST00000505862 819 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.53□□□□□ -1.68
FREM3P0C091 AC012339.2-201ENST00000523996 453 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 OR8G5-201ENST00000524943 1041 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 AL359219.2-201ENST00000555184 348 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.53□□□□□ -1.68
FREM3P0C091 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.53□□□□□ -1.68
FREM3P0C091 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
FREM3P0C091 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 INTS6P1-201ENST00000504674 2530 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.53□□□□□ -1.68
FREM3P0C091 MAPK10-338ENST00000641647 3362 ntBASIC4.53□□□□□ -1.68
FREM3P0C091 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FREM3P0C091 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
FREM3P0C091 AL590240.1-201ENST00000334118 313 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 RNA5SP223-201ENST00000365174 120 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AL645733.1-201ENST00000402250 217 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 GJA6P-201ENST00000415117 1042 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FREM3P0C091 AC100784.1-201ENST00000522790 310 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.52□□□□□ -1.69
FREM3P0C091 AC105129.1-201ENST00000560250 297 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.52□□□□□ -1.69
FREM3P0C091 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.52□□□□□ -1.69
FREM3P0C091 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.52□□□□□ -1.69
FREM3P0C091 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.52□□□□□ -1.69
FREM3P0C091 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.52□□□□□ -1.69
FREM3P0C091 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FREM3P0C091 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FREM3P0C091 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FREM3P0C091 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.52□□□□□ -1.69
FREM3P0C091 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FREM3P0C091 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 CHMP1B2P-201ENST00000399581 597 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AL360081.1-201ENST00000428299 555 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FREM3P0C091 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.52□□□□□ -1.69
FREM3P0C091 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 RPL31P44-201ENST00000447680 377 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FREM3P0C091 RPL7P61-201ENST00000451721 751 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AC093890.1-201ENST00000502554 540 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 MRPS33P2-201ENST00000507850 322 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.52□□□□□ -1.69
FREM3P0C091 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.52□□□□□ -1.69
FREM3P0C091 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.52□□□□□ -1.69
FREM3P0C091 MIR4270-201ENST00000581799 70 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 AL162431.4-201ENST00000604674 411 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FREM3P0C091 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
FREM3P0C091 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.52□□□□□ -1.69
FREM3P0C091 NEAT1-202ENST00000501122 22743 ntBASIC4.52□□□□□ -1.69
FREM3P0C091 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.52□□□□□ -1.69
FREM3P0C091 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.51□□□□□ -1.69
FREM3P0C091 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FREM3P0C091 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.51□□□□□ -1.69
FREM3P0C091 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms