Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM1P09493 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TPM1P09493 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
TPM1P09493 AL606537.1-201ENST00000607258 2011 ntBASIC5.57□□□□□ -1.52
TPM1P09493 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TPM1P09493 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
TPM1P09493 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TPM1P09493 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TPM1P09493 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TPM1P09493 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TPM1P09493 RNA5SP335-201ENST00000363817 110 ntBASIC5.57□□□□□ -1.52
TPM1P09493 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TPM1P09493 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.57□□□□□ -1.52
TPM1P09493 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.57□□□□□ -1.52
TPM1P09493 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.57□□□□□ -1.52
TPM1P09493 AL589765.3-201ENST00000446084 462 ntBASIC5.57□□□□□ -1.52
TPM1P09493 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.57□□□□□ -1.52
TPM1P09493 RPS6P2-201ENST00000454208 705 ntBASIC5.57□□□□□ -1.52
TPM1P09493 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 RN7SL443P-201ENST00000464331 290 ntBASIC5.57□□□□□ -1.52
TPM1P09493 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TPM1P09493 RN7SL170P-201ENST00000487098 295 ntBASIC5.57□□□□□ -1.52
TPM1P09493 AC020890.1-201ENST00000491837 504 ntBASIC5.57□□□□□ -1.52
TPM1P09493 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.57□□□□□ -1.52
TPM1P09493 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.57□□□□□ -1.52
TPM1P09493 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TPM1P09493 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.57□□□□□ -1.52
TPM1P09493 RN7SL52P-201ENST00000584271 284 ntBASIC5.57□□□□□ -1.52
TPM1P09493 RN7SL787P-201ENST00000613000 284 ntBASIC5.57□□□□□ -1.52
TPM1P09493 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TPM1P09493 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.57□□□□□ -1.52
TPM1P09493 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TPM1P09493 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 AL133268.1-201ENST00000405676 1401 ntBASIC5.57□□□□□ -1.52
TPM1P09493 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM1P09493 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.56□□□□□ -1.52
TPM1P09493 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TPM1P09493 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.56□□□□□ -1.52
TPM1P09493 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.56□□□□□ -1.52
TPM1P09493 SNORA2.3-201ENST00000383920 135 ntBASIC5.56□□□□□ -1.52
TPM1P09493 RNU1-149P-201ENST00000390870 161 ntBASIC5.56□□□□□ -1.52
TPM1P09493 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
TPM1P09493 SLC20A1P1-201ENST00000413906 956 ntBASIC5.56□□□□□ -1.52
TPM1P09493 SDHDP6-201ENST00000414693 480 ntBASIC5.56□□□□□ -1.52
TPM1P09493 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.56□□□□□ -1.52
TPM1P09493 FABP7P2-201ENST00000429946 379 ntBASIC5.56□□□□□ -1.52
TPM1P09493 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TPM1P09493 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.56□□□□□ -1.52
TPM1P09493 UBE2V2P4-201ENST00000447495 259 ntBASIC5.56□□□□□ -1.52
TPM1P09493 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.56□□□□□ -1.52
TPM1P09493 AC002553.2-201ENST00000453217 340 ntBASIC5.56□□□□□ -1.52
TPM1P09493 AL133445.1-201ENST00000467051 452 ntBASIC5.56□□□□□ -1.52
TPM1P09493 RPL9P15-201ENST00000491096 532 ntBASIC5.56□□□□□ -1.52
TPM1P09493 GTF2F2P1-201ENST00000511083 675 ntBASIC5.56□□□□□ -1.52
TPM1P09493 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.56□□□□□ -1.52
TPM1P09493 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.56□□□□□ -1.52
TPM1P09493 IGKV2-4-201ENST00000523070 340 ntBASIC5.56□□□□□ -1.52
TPM1P09493 AC022882.1-201ENST00000532142 501 ntBASIC5.56□□□□□ -1.52
TPM1P09493 TOMM20P1-201ENST00000534518 427 ntBASIC5.56□□□□□ -1.52
TPM1P09493 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TPM1P09493 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.56□□□□□ -1.52
TPM1P09493 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.56□□□□□ -1.52
TPM1P09493 AC233280.2-201ENST00000603917 1070 ntBASIC5.56□□□□□ -1.52
TPM1P09493 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.56□□□□□ -1.52
TPM1P09493 AP005131.7-201ENST00000610087 611 ntBASIC5.56□□□□□ -1.52
TPM1P09493 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.56□□□□□ -1.52
TPM1P09493 SAMMSON-209ENST00000641222 1100 ntBASIC5.56□□□□□ -1.52
TPM1P09493 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TPM1P09493 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.56□□□□□ -1.52
TPM1P09493 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.56□□□□□ -1.52
TPM1P09493 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.55□□□□□ -1.52
TPM1P09493 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TPM1P09493 AC027290.2-201ENST00000623210 18662 ntBASIC5.55□□□□□ -1.52
TPM1P09493 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TPM1P09493 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TPM1P09493 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TPM1P09493 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TPM1P09493 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TPM1P09493 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TPM1P09493 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TPM1P09493 BMS1P3-201ENST00000372011 932 ntBASIC5.55□□□□□ -1.52
TPM1P09493 AP000580.1-201ENST00000404439 358 ntBASIC5.55□□□□□ -1.52
TPM1P09493 TMBIM7P-201ENST00000418074 855 ntBASIC5.55□□□□□ -1.52
TPM1P09493 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.55□□□□□ -1.52
TPM1P09493 AC115283.1-201ENST00000427353 400 ntBASIC5.55□□□□□ -1.52
TPM1P09493 FAM96AP1-201ENST00000430879 482 ntBASIC5.55□□□□□ -1.52
TPM1P09493 TMX2P1-201ENST00000436507 708 ntBASIC5.55□□□□□ -1.52
TPM1P09493 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.55□□□□□ -1.52
TPM1P09493 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.55□□□□□ -1.52
TPM1P09493 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.55□□□□□ -1.52
TPM1P09493 ENPP7P9-201ENST00000514456 627 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms