Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPS11P7-201ENST00000442125 465 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 TIMM8BP2-201ENST00000445940 251 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC105399.1-202ENST00000447303 205 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 OTX2P1-201ENST00000450956 354 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC006967.1-201ENST00000467608 589 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CXCL1P09341 RN7SL41P-201ENST00000476144 297 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL1P09341 RPL7P40-201ENST00000481703 745 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC021006.1-201ENST00000489849 553 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 OR9N1P-201ENST00000491296 333 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC104971.1-201ENST00000495117 578 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.86□□□□□ -1.79
CXCL1P09341 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL1P09341 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 RNA5SP392-201ENST00000516905 112 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC060775.1-201ENST00000518241 520 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.86□□□□□ -1.79
CXCL1P09341 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL1P09341 YWHABP2-201ENST00000540201 713 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 AC084759.1-201ENST00000561168 290 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.86□□□□□ -1.79
CXCL1P09341 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL1P09341 MTND6P33-201ENST00000571794 183 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 MIR3154-201ENST00000577829 84 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC008638.3-201ENST00000603341 463 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AL139395.1-201ENST00000603662 160 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 AC133552.5-201ENST00000604266 540 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 AC118658.2-201ENST00000618697 459 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 REV3L-214ENST00000619481 969 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.86□□□□□ -1.79
CXCL1P09341 AC007683.2-201ENST00000624681 714 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 DDX18P5-201ENST00000534547 1306 ntBASIC3.86□□□□□ -1.79
CXCL1P09341 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL1P09341 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.86□□□□□ -1.79
CXCL1P09341 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CXCL1P09341 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CXCL1P09341 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CXCL1P09341 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
CXCL1P09341 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL1P09341 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL1P09341 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 YES1P1-201ENST00000418510 1628 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CXCL1P09341 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.85□□□□□ -1.79
CXCL1P09341 AL359922.3-201ENST00000624779 1670 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 OR52B1P-201ENST00000316506 909 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CXCL1P09341 RNA5SP394-201ENST00000364216 119 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 OR8V1P-201ENST00000395193 873 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 HSPA8P15-201ENST00000401676 786 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 AC233289.1-201ENST00000403700 508 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 SLC35E1P1-201ENST00000419313 864 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 GAPDHP34-201ENST00000432112 823 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.85□□□□□ -1.79
CXCL1P09341 CTSLP6-201ENST00000458273 1002 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 AC091180.1-201ENST00000462104 372 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.85□□□□□ -1.79
CXCL1P09341 RN7SL441P-201ENST00000492388 296 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 AL117692.1-201ENST00000494283 713 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL1P09341 RNA5SP154-201ENST00000516193 111 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.85□□□□□ -1.79
CXCL1P09341 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL1P09341 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL1P09341 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.85□□□□□ -1.79
CXCL1P09341 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC3.85□□□□□ -1.79
CXCL1P09341 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL1P09341 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.85□□□□□ -1.79
CXCL1P09341 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.85□□□□□ -1.79
CXCL1P09341 AP005432.2-201ENST00000608162 586 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms