Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RNU6-398P-201ENST00000384143 109 ntBASIC5.36□□□□□ -1.55
RETP07949 SNORA16A-201ENST00000384342 137 ntBASIC5.36□□□□□ -1.55
RETP07949 U3.28-201ENST00000391249 210 ntBASIC5.36□□□□□ -1.55
RETP07949 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.36□□□□□ -1.55
RETP07949 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.36□□□□□ -1.55
RETP07949 OR6C64P-201ENST00000419708 825 ntBASIC5.36□□□□□ -1.55
RETP07949 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.36□□□□□ -1.55
RETP07949 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.36□□□□□ -1.55
RETP07949 AC008072.1-201ENST00000434254 824 ntBASIC5.36□□□□□ -1.55
RETP07949 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.36□□□□□ -1.55
RETP07949 GAPDHP25-201ENST00000447061 1001 ntBASIC5.36□□□□□ -1.55
RETP07949 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.36□□□□□ -1.55
RETP07949 NDUFA12P1-201ENST00000455914 406 ntBASIC5.36□□□□□ -1.55
RETP07949 ATP5LP5-201ENST00000483050 299 ntBASIC5.36□□□□□ -1.55
RETP07949 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.36□□□□□ -1.55
RETP07949 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.36□□□□□ -1.55
RETP07949 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.36□□□□□ -1.55
RETP07949 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.36□□□□□ -1.55
RETP07949 AC138832.1-201ENST00000522871 556 ntBASIC5.36□□□□□ -1.55
RETP07949 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.36□□□□□ -1.55
RETP07949 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.36□□□□□ -1.55
RETP07949 AC005341.1-201ENST00000571086 708 ntBASIC5.36□□□□□ -1.55
RETP07949 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RETP07949 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.36□□□□□ -1.55
RETP07949 MIR4270-201ENST00000581799 70 ntBASIC5.36□□□□□ -1.55
RETP07949 H3F3BP2-201ENST00000583907 357 ntBASIC5.36□□□□□ -1.55
RETP07949 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.36□□□□□ -1.55
RETP07949 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.36□□□□□ -1.55
RETP07949 AC087385.3-201ENST00000620477 187 ntBASIC5.36□□□□□ -1.55
RETP07949 AC112694.2-201ENST00000623697 768 ntBASIC5.36□□□□□ -1.55
RETP07949 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RETP07949 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.36□□□□□ -1.55
RETP07949 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.36□□□□□ -1.55
RETP07949 TMEM30CP-203ENST00000637814 1035 ntBASIC5.36□□□□□ -1.55
RETP07949 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RETP07949 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.36□□□□□ -1.55
RETP07949 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RETP07949 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RETP07949 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RETP07949 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
RETP07949 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
RETP07949 AC104260.2-201ENST00000623551 3497 ntBASIC5.36□□□□□ -1.55
RETP07949 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
RETP07949 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RETP07949 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RETP07949 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.35□□□□□ -1.55
RETP07949 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RETP07949 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RETP07949 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RETP07949 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RETP07949 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RETP07949 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RETP07949 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RETP07949 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RETP07949 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.35□□□□□ -1.55
RETP07949 SNURFL-201ENST00000309296 343 ntBASIC5.35□□□□□ -1.55
RETP07949 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.35□□□□□ -1.55
RETP07949 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.35□□□□□ -1.55
RETP07949 TMEM183AP1-205ENST00000432739 290 ntBASIC5.35□□□□□ -1.55
RETP07949 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.35□□□□□ -1.55
RETP07949 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RETP07949 PSAT1P4-201ENST00000466500 526 ntBASIC5.35□□□□□ -1.55
RETP07949 RPL37AP8-201ENST00000494116 276 ntBASIC5.35□□□□□ -1.55
RETP07949 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.35□□□□□ -1.55
RETP07949 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.35□□□□□ -1.55
RETP07949 AC122688.1-201ENST00000541494 223 ntBASIC5.35□□□□□ -1.55
RETP07949 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.35□□□□□ -1.55
RETP07949 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.35□□□□□ -1.55
RETP07949 AP005262.1-201ENST00000582646 997 ntBASIC5.35□□□□□ -1.55
RETP07949 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.35□□□□□ -1.55
RETP07949 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.35□□□□□ -1.55
RETP07949 AC009597.2-201ENST00000604659 592 ntBASIC5.35□□□□□ -1.55
RETP07949 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.35□□□□□ -1.55
RETP07949 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
RETP07949 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RETP07949 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETP07949 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RETP07949 MIPEPP2-201ENST00000422560 1819 ntBASIC5.34□□□□□ -1.55
RETP07949 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.34□□□□□ -1.55
RETP07949 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 BTBD10P1-201ENST00000549824 1352 ntBASIC5.34□□□□□ -1.55
RETP07949 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RETP07949 AC027228.2-201ENST00000567141 2154 ntBASIC5.34□□□□□ -1.55
RETP07949 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 RN7SKP113-201ENST00000363891 295 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms