Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.73□□□□□ -1.49
RB1P06400 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.73□□□□□ -1.49
RB1P06400 AP004607.2-201ENST00000533949 322 ntBASIC5.73□□□□□ -1.49
RB1P06400 AC134349.2-201ENST00000535136 910 ntBASIC5.73□□□□□ -1.49
RB1P06400 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.73□□□□□ -1.49
RB1P06400 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.73□□□□□ -1.49
RB1P06400 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.73□□□□□ -1.49
RB1P06400 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.73□□□□□ -1.49
RB1P06400 AC112694.2-201ENST00000623697 768 ntBASIC5.73□□□□□ -1.49
RB1P06400 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.73□□□□□ -1.49
RB1P06400 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.73□□□□□ -1.49
RB1P06400 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RB1P06400 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.73□□□□□ -1.49
RB1P06400 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RB1P06400 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RB1P06400 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RB1P06400 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
RB1P06400 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.72□□□□□ -1.49
RB1P06400 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
RB1P06400 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 AL121886.1-201ENST00000358609 435 ntBASIC5.72□□□□□ -1.49
RB1P06400 MIR192-201ENST00000384915 110 ntBASIC5.72□□□□□ -1.49
RB1P06400 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 HSPA8P15-201ENST00000401676 786 ntBASIC5.72□□□□□ -1.49
RB1P06400 NUDT19P3-201ENST00000404698 555 ntBASIC5.72□□□□□ -1.49
RB1P06400 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RB1P06400 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 RIMKLBP2-201ENST00000424737 654 ntBASIC5.72□□□□□ -1.49
RB1P06400 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.72□□□□□ -1.49
RB1P06400 MTATP6P11-201ENST00000428071 670 ntBASIC5.72□□□□□ -1.49
RB1P06400 MTND4LP14-201ENST00000429447 288 ntBASIC5.72□□□□□ -1.49
RB1P06400 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.72□□□□□ -1.49
RB1P06400 RPS29P33-201ENST00000456717 146 ntBASIC5.72□□□□□ -1.49
RB1P06400 RN7SL738P-201ENST00000470264 297 ntBASIC5.72□□□□□ -1.49
RB1P06400 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.72□□□□□ -1.49
RB1P06400 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 AC067904.2-201ENST00000517322 1283 ntBASIC5.72□□□□□ -1.49
RB1P06400 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.72□□□□□ -1.49
RB1P06400 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 AP002373.2-201ENST00000541631 1060 ntBASIC5.72□□□□□ -1.49
RB1P06400 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 AC079075.1-201ENST00000559543 878 ntBASIC5.72□□□□□ -1.49
RB1P06400 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.72□□□□□ -1.49
RB1P06400 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.72□□□□□ -1.49
RB1P06400 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.72□□□□□ -1.49
RB1P06400 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.72□□□□□ -1.49
RB1P06400 AC012557.1-201ENST00000607115 611 ntBASIC5.72□□□□□ -1.49
RB1P06400 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.72□□□□□ -1.49
RB1P06400 uc_338.18-201ENST00000615451 175 ntBASIC5.72□□□□□ -1.49
RB1P06400 AL731566.2-201ENST00000618971 317 ntBASIC5.72□□□□□ -1.49
RB1P06400 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.72□□□□□ -1.49
RB1P06400 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RB1P06400 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.72□□□□□ -1.49
RB1P06400 AL158152.1-201ENST00000602652 1435 ntBASIC5.72□□□□□ -1.49
RB1P06400 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RB1P06400 OR4F13P-202ENST00000560066 2054 ntBASIC5.71□□□□□ -1.49
RB1P06400 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RB1P06400 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.71□□□□□ -1.49
RB1P06400 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RB1P06400 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RB1P06400 AC009962.1-201ENST00000567327 3813 ntBASIC5.71□□□□□ -1.49
RB1P06400 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RB1P06400 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
RB1P06400 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RB1P06400 MTND4P21-201ENST00000453886 1357 ntBASIC5.71□□□□□ -1.5
RB1P06400 CASC19-221ENST00000641309 1382 ntBASIC5.71□□□□□ -1.5
RB1P06400 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RB1P06400 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.71□□□□□ -1.5
RB1P06400 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RB1P06400 AL078621.3-201ENST00000623707 2042 ntBASIC5.71□□□□□ -1.5
RB1P06400 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RB1P06400 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RB1P06400 RN7SKP149-201ENST00000363008 344 ntBASIC5.71□□□□□ -1.5
RB1P06400 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
RB1P06400 MIR600-201ENST00000385007 98 ntBASIC5.71□□□□□ -1.5
RB1P06400 SNORD65-201ENST00000391079 73 ntBASIC5.71□□□□□ -1.5
RB1P06400 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.71□□□□□ -1.5
RB1P06400 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RB1P06400 USP9YP19-201ENST00000412165 485 ntBASIC5.71□□□□□ -1.5
RB1P06400 AC019070.1-201ENST00000415008 1024 ntBASIC5.71□□□□□ -1.5
RB1P06400 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RB1P06400 USP24P1-201ENST00000433802 779 ntBASIC5.71□□□□□ -1.5
RB1P06400 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms