Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU6-875P-201ENST00000516488 106 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.77□□□□□ -1.33
PDGFAP04085 AC008429.4-201ENST00000521201 182 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 COX6B1P6-201ENST00000522347 255 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.77□□□□□ -1.33
PDGFAP04085 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.77□□□□□ -1.33
PDGFAP04085 AC090971.3-201ENST00000557871 1041 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 HMGB1P33-201ENST00000563485 527 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AL133457.1-201ENST00000564251 987 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 AL391840.1-201ENST00000571144 367 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 MIR5682-201ENST00000584864 76 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.77□□□□□ -1.33
PDGFAP04085 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 BNIP3P23-201ENST00000599655 511 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AL117336.2-201ENST00000602435 335 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AC092032.1-201ENST00000603090 165 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 MIR6885-201ENST00000612241 66 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.77□□□□□ -1.33
PDGFAP04085 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.77□□□□□ -1.33
PDGFAP04085 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 AC090643.1-201ENST00000623600 3100 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 ZNF658B-201ENST00000602828 3408 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AC009220.2-201ENST00000489759 1751 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 RPS4XP5-202ENST00000449995 1334 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 AL133243.2-201ENST00000610331 1621 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 AC021242.1-201ENST00000507315 2035 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 OR4K15-201ENST00000305051 1216 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PDGFAP04085 RNU1-56P-201ENST00000391303 164 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 FAUP2-201ENST00000394301 401 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 CALM2P3-201ENST00000400429 449 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AL450338.1-201ENST00000407987 512 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AL157884.1-201ENST00000424561 454 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 RPS24P8-201ENST00000431490 402 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC005040.1-201ENST00000437783 482 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC002504.1-201ENST00000438281 691 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.76□□□□□ -1.33
PDGFAP04085 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 AC005550.2-201ENST00000476382 318 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC044810.1-201ENST00000480271 711 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 RN7SL849P-201ENST00000485236 295 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AL117692.1-201ENST00000494283 713 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 AC091951.2-201ENST00000500762 203 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC114981.1-201ENST00000503897 678 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC096754.1-201ENST00000508904 818 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 SCARNA20.1-201ENST00000516009 138 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 RN7SKP283-201ENST00000517197 270 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 IGKV2-29-201ENST00000521304 372 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.76□□□□□ -1.33
PDGFAP04085 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 AP000435.1-201ENST00000528539 496 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 AC012146.2-201ENST00000576545 416 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.76□□□□□ -1.33
PDGFAP04085 AC008752.3-201ENST00000588113 712 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 AC078795.3-201ENST00000602913 472 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC015819.1-201ENST00000613588 663 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 AC211433.3-201ENST00000623770 375 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC021106.3-201ENST00000623925 531 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms