Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.38□□□□□ -1.55
APOEP02649 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.38□□□□□ -1.55
APOEP02649 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.38□□□□□ -1.55
APOEP02649 U8.4-201ENST00000363626 134 ntBASIC5.38□□□□□ -1.55
APOEP02649 MIR105-2-201ENST00000385083 81 ntBASIC5.38□□□□□ -1.55
APOEP02649 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.38□□□□□ -1.55
APOEP02649 RN7SKP278-201ENST00000410504 342 ntBASIC5.38□□□□□ -1.55
APOEP02649 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.38□□□□□ -1.55
APOEP02649 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.38□□□□□ -1.55
APOEP02649 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.38□□□□□ -1.55
APOEP02649 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.38□□□□□ -1.55
APOEP02649 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.38□□□□□ -1.55
APOEP02649 AC245028.2-201ENST00000458673 253 ntBASIC5.38□□□□□ -1.55
APOEP02649 AC004815.1-201ENST00000484185 331 ntBASIC5.38□□□□□ -1.55
APOEP02649 COX6B1P2-201ENST00000489624 230 ntBASIC5.38□□□□□ -1.55
APOEP02649 AC008953.1-201ENST00000497334 318 ntBASIC5.38□□□□□ -1.55
APOEP02649 AC093890.1-201ENST00000502554 540 ntBASIC5.38□□□□□ -1.55
APOEP02649 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.38□□□□□ -1.55
APOEP02649 AC147055.3-201ENST00000510547 851 ntBASIC5.38□□□□□ -1.55
APOEP02649 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.38□□□□□ -1.55
APOEP02649 RN7SKP260-201ENST00000516907 149 ntBASIC5.38□□□□□ -1.55
APOEP02649 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.38□□□□□ -1.55
APOEP02649 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.38□□□□□ -1.55
APOEP02649 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.38□□□□□ -1.55
APOEP02649 AP002373.2-201ENST00000541631 1060 ntBASIC5.38□□□□□ -1.55
APOEP02649 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 AC092490.3-201ENST00000545370 572 ntBASIC5.38□□□□□ -1.55
APOEP02649 AC016180.1-201ENST00000567945 403 ntBASIC5.38□□□□□ -1.55
APOEP02649 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.38□□□□□ -1.55
APOEP02649 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.38□□□□□ -1.55
APOEP02649 TMEM30CP-203ENST00000637814 1035 ntBASIC5.38□□□□□ -1.55
APOEP02649 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 AC109780.1-201ENST00000451768 1344 ntBASIC5.38□□□□□ -1.55
APOEP02649 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 BTBD10P1-201ENST00000549824 1352 ntBASIC5.38□□□□□ -1.55
APOEP02649 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
APOEP02649 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.38□□□□□ -1.55
APOEP02649 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
APOEP02649 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.37□□□□□ -1.55
APOEP02649 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.37□□□□□ -1.55
APOEP02649 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
APOEP02649 SPTLC1P2-201ENST00000407089 121 ntBASIC5.37□□□□□ -1.55
APOEP02649 RN7SKP97-201ENST00000410966 333 ntBASIC5.37□□□□□ -1.55
APOEP02649 NPM1P40-201ENST00000412758 733 ntBASIC5.37□□□□□ -1.55
APOEP02649 PCNPP4-201ENST00000414817 517 ntBASIC5.37□□□□□ -1.55
APOEP02649 OR13Z1P-201ENST00000416141 834 ntBASIC5.37□□□□□ -1.55
APOEP02649 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.37□□□□□ -1.55
APOEP02649 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 RPSAP50-201ENST00000481955 852 ntBASIC5.37□□□□□ -1.55
APOEP02649 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 USP9YP2-201ENST00000504503 1000 ntBASIC5.37□□□□□ -1.55
APOEP02649 USP9YP1-201ENST00000513521 1002 ntBASIC5.37□□□□□ -1.55
APOEP02649 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.37□□□□□ -1.55
APOEP02649 HMGN2P6-201ENST00000551091 273 ntBASIC5.37□□□□□ -1.55
APOEP02649 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
APOEP02649 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.37□□□□□ -1.55
APOEP02649 MIR3691-201ENST00000578066 90 ntBASIC5.37□□□□□ -1.55
APOEP02649 AC016769.4-201ENST00000616893 535 ntBASIC5.37□□□□□ -1.55
APOEP02649 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
APOEP02649 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 CR383656.5-201ENST00000547616 1340 ntBASIC5.37□□□□□ -1.55
APOEP02649 AC104623.2-202ENST00000623477 4002 ntBASIC5.37□□□□□ -1.55
APOEP02649 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.37□□□□□ -1.55
APOEP02649 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
APOEP02649 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
APOEP02649 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.36□□□□□ -1.55
APOEP02649 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 MIR765-201ENST00000390226 114 ntBASIC5.36□□□□□ -1.55
APOEP02649 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.36□□□□□ -1.55
APOEP02649 DPPA2P3-201ENST00000411853 655 ntBASIC5.36□□□□□ -1.55
APOEP02649 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms