Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.68□□□□□ -1.66
SPTA1P02549 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 AC032011.1-201ENST00000611703 1549 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 CYP1D1P-201ENST00000416662 1433 ntBASIC4.68□□□□□ -1.66
SPTA1P02549 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
SPTA1P02549 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.68□□□□□ -1.66
SPTA1P02549 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTA1P02549 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPTA1P02549 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SPTA1P02549 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SPTA1P02549 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SPTA1P02549 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.67□□□□□ -1.66
SPTA1P02549 RNA5SP428-201ENST00000365129 132 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.67□□□□□ -1.66
SPTA1P02549 AL136455.1-201ENST00000441083 1240 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.67□□□□□ -1.66
SPTA1P02549 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.67□□□□□ -1.66
SPTA1P02549 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.67□□□□□ -1.66
SPTA1P02549 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.67□□□□□ -1.66
SPTA1P02549 AC122688.1-201ENST00000541494 223 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 AL627230.1-201ENST00000613077 211 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 AL591926.8-201ENST00000616876 211 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC4.67□□□□□ -1.66
SPTA1P02549 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTA1P02549 AC062029.1-202ENST00000606164 3651 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 PARN-201ENST00000341484 2100 ntTSL 2 BASIC4.67□□□□□ -1.66
SPTA1P02549 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTA1P02549 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTA1P02549 CCT8P1-201ENST00000413611 1657 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTA1P02549 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTA1P02549 RPL36AP36-201ENST00000418616 301 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 AC073143.1-201ENST00000436316 395 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.67□□□□□ -1.66
SPTA1P02549 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.67□□□□□ -1.66
SPTA1P02549 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
SPTA1P02549 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SPTA1P02549 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.67□□□□□ -1.66
SPTA1P02549 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SPTA1P02549 AC006133.1-201ENST00000617106 264 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 AC004076.2-201ENST00000620532 3323 ntBASIC4.67□□□□□ -1.66
SPTA1P02549 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC4.67□□□□□ -1.66
SPTA1P02549 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SPTA1P02549 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.66□□□□□ -1.66
SPTA1P02549 AC006210.2-201ENST00000367074 1545 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 AMZ2P2-201ENST00000406819 1057 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 AC114755.2-201ENST00000413520 361 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 RAD23BP1-201ENST00000421404 1227 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC4.66□□□□□ -1.66
SPTA1P02549 AC124944.2-201ENST00000429866 1242 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.66□□□□□ -1.66
SPTA1P02549 VN1R34P-201ENST00000447387 883 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 OR1H1P-201ENST00000448731 937 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 AC092754.1-201ENST00000472975 479 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.66□□□□□ -1.66
SPTA1P02549 AK3P4-201ENST00000504283 583 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SPTA1P02549 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.66□□□□□ -1.66
SPTA1P02549 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.66□□□□□ -1.66
SPTA1P02549 AP003400.3-201ENST00000624904 346 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
SPTA1P02549 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SPTA1P02549 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SPTA1P02549 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.66□□□□□ -1.66
SPTA1P02549 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTA1P02549 OR4F13P-202ENST00000560066 2054 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SPTA1P02549 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTA1P02549 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.66□□□□□ -1.66
SPTA1P02549 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SPTA1P02549 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTA1P02549 AC015799.1-201ENST00000622996 3122 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 U3.10-201ENST00000364459 214 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTA1P02549 MIR105-1-201ENST00000385222 81 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.66□□□□□ -1.66
SPTA1P02549 RIMKLBP2-201ENST00000424737 654 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.66□□□□□ -1.66
SPTA1P02549 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.66□□□□□ -1.66
SPTA1P02549 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.66□□□□□ -1.66
SPTA1P02549 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.66□□□□□ -1.66
SPTA1P02549 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.66□□□□□ -1.66
SPTA1P02549 RN7SKP83-201ENST00000516512 178 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 SNORA67.7-201ENST00000516664 135 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.66□□□□□ -1.66
SPTA1P02549 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.66□□□□□ -1.66
SPTA1P02549 AC067959.1-201ENST00000604334 379 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 MTCO1P1-201ENST00000624263 1081 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTA1P02549 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.66□□□□□ -1.66
SPTA1P02549 AC025031.4-201ENST00000621248 3271 ntBASIC4.66□□□□□ -1.66
SPTA1P02549 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SPTA1P02549 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SPTA1P02549 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SPTA1P02549 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SPTA1P02549 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.65□□□□□ -1.66
SPTA1P02549 ST13P16-201ENST00000401760 781 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms