Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.05□□□□□ -1.6
CLPTM1O96005 RNU6-368P-201ENST00000620928 107 ntBASIC5.05□□□□□ -1.6
CLPTM1O96005 RNU6-538P-201ENST00000622329 107 ntBASIC5.05□□□□□ -1.6
CLPTM1O96005 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.05□□□□□ -1.6
CLPTM1O96005 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CLPTM1O96005 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLPTM1O96005 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CLPTM1O96005 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLPTM1O96005 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.05□□□□□ -1.6
CLPTM1O96005 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLPTM1O96005 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.05□□□□□ -1.6
CLPTM1O96005 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLPTM1O96005 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.05□□□□□ -1.6
CLPTM1O96005 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.05□□□□□ -1.6
CLPTM1O96005 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLPTM1O96005 NEPNP-201ENST00000404786 1371 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 PDZK1P1-202ENST00000425209 1350 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 CASC19-221ENST00000641309 1382 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLPTM1O96005 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLPTM1O96005 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.04□□□□□ -1.6
CLPTM1O96005 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 OR52B3P-201ENST00000314715 928 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC023490.2-201ENST00000359859 470 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 RNA5SP500-201ENST00000364486 119 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 RNA5SP510-201ENST00000364697 99 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 RN7SKP15-201ENST00000364742 309 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 SNORA68.2-201ENST00000391263 128 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CLPTM1O96005 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLPTM1O96005 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC016739.1-201ENST00000405359 345 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 UBE2V1P15-201ENST00000407776 448 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AL512504.1-201ENST00000415494 778 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.04□□□□□ -1.6
CLPTM1O96005 RPL12P43-201ENST00000420608 499 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.04□□□□□ -1.6
CLPTM1O96005 BTF3P6-201ENST00000448054 499 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AL596266.1-201ENST00000448132 400 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AP006222.1-205ENST00000450734 457 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AC093166.4-201ENST00000457867 318 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AC084754.1-201ENST00000463466 464 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AC011476.1-201ENST00000466725 307 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC090568.1-201ENST00000509499 856 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.04□□□□□ -1.6
CLPTM1O96005 MTND4LP25-201ENST00000570218 163 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.04□□□□□ -1.6
CLPTM1O96005 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 AC100767.2-201ENST00000604840 693 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AC096553.1-201ENST00000605169 829 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AL356490.1-201ENST00000623079 479 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 AP003499.2-201ENST00000624100 483 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLPTM1O96005 OR8G3P-202ENST00000641572 1255 ntBASIC5.04□□□□□ -1.6
CLPTM1O96005 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CLPTM1O96005 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CLPTM1O96005 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.04□□□□□ -1.6
CLPTM1O96005 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.04□□□□□ -1.6
CLPTM1O96005 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLPTM1O96005 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CLPTM1O96005 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
CLPTM1O96005 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.03□□□□□ -1.6
CLPTM1O96005 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.03□□□□□ -1.6
CLPTM1O96005 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.03□□□□□ -1.6
CLPTM1O96005 RN7SKP29-201ENST00000410957 272 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 AC245060.4-201ENST00000413293 1121 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.03□□□□□ -1.6
CLPTM1O96005 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.03□□□□□ -1.6
CLPTM1O96005 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.03□□□□□ -1.6
CLPTM1O96005 AL392003.1-201ENST00000434394 243 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 RPL12P11-201ENST00000439970 501 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.03□□□□□ -1.6
CLPTM1O96005 AC011225.1-201ENST00000457751 369 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.03□□□□□ -1.6
CLPTM1O96005 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 RN7SL447P-201ENST00000494711 245 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms