Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC009299.1-201ENST00000429684 717 ntBASIC8.13□□□□□ -1.11
RNF40O75150 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF40O75150 NPM1P39-201ENST00000449818 867 ntBASIC8.13□□□□□ -1.11
RNF40O75150 DNAJC19P8-201ENST00000452887 259 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.13□□□□□ -1.11
RNF40O75150 RPL18AP17-201ENST00000455326 198 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF40O75150 U8.20-201ENST00000459445 131 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC016489.1-201ENST00000461109 375 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.13□□□□□ -1.11
RNF40O75150 RN7SL228P-201ENST00000470060 303 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC010301.1-201ENST00000473936 355 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF40O75150 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF40O75150 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC8.13□□□□□ -1.11
RNF40O75150 AC026700.1-201ENST00000512074 544 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC114797.1-201ENST00000514003 728 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC117383.2-201ENST00000514722 322 ntBASIC8.13□□□□□ -1.11
RNF40O75150 RNU6-406P-201ENST00000516470 107 ntBASIC8.13□□□□□ -1.11
RNF40O75150 RNU6-1271P-201ENST00000517049 105 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF40O75150 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF40O75150 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC8.13□□□□□ -1.11
RNF40O75150 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF40O75150 AC008269.2-201ENST00000561915 1105 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC113194.1-201ENST00000606037 500 ntBASIC8.13□□□□□ -1.11
RNF40O75150 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF40O75150 AL732618.1-201ENST00000623251 301 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AC099667.1-201ENST00000624222 469 ntBASIC8.13□□□□□ -1.11
RNF40O75150 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.13□□□□□ -1.11
RNF40O75150 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RNF40O75150 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
RNF40O75150 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF40O75150 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF40O75150 AP000473.2-201ENST00000602659 1537 ntBASIC8.13□□□□□ -1.11
RNF40O75150 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 CDR1-202ENST00000625883 1485 ntBASIC8.13□□□□□ -1.11
RNF40O75150 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
RNF40O75150 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.12□□□□□ -1.11
RNF40O75150 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.12□□□□□ -1.11
RNF40O75150 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RNF40O75150 DDX18P6-201ENST00000450119 1997 ntBASIC8.12□□□□□ -1.11
RNF40O75150 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 Y_RNA.381-201ENST00000365666 102 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AC074375.1-201ENST00000372993 192 ntBASIC8.12□□□□□ -1.11
RNF40O75150 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RNF40O75150 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
RNF40O75150 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 AL589647.1-201ENST00000402485 466 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.12□□□□□ -1.11
RNF40O75150 MTCO2P27-201ENST00000420740 428 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AL645937.1-202ENST00000421799 937 ntBASIC8.12□□□□□ -1.11
RNF40O75150 BEND7P1-201ENST00000422058 457 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC8.12□□□□□ -1.11
RNF40O75150 AL136454.1-201ENST00000443181 466 ntBASIC8.12□□□□□ -1.11
RNF40O75150 VN1R38P-201ENST00000450265 887 ntBASIC8.12□□□□□ -1.11
RNF40O75150 CACYBPP2-201ENST00000453625 678 ntBASIC8.12□□□□□ -1.11
RNF40O75150 RNU7-152P-201ENST00000458982 64 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.12□□□□□ -1.11
RNF40O75150 RPS3AP50-201ENST00000487064 803 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AC090638.1-201ENST00000498296 909 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AC093325.1-201ENST00000508378 326 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AC022296.2-201ENST00000512424 202 ntBASIC8.12□□□□□ -1.11
RNF40O75150 Y_RNA.718-201ENST00000517110 102 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.12□□□□□ -1.11
RNF40O75150 AC091982.1-201ENST00000518134 520 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.12□□□□□ -1.11
RNF40O75150 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC8.12□□□□□ -1.11
RNF40O75150 HNRNPCP8-201ENST00000528764 888 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.12□□□□□ -1.11
RNF40O75150 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC8.12□□□□□ -1.11
RNF40O75150 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.12□□□□□ -1.11
RNF40O75150 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.12□□□□□ -1.11
RNF40O75150 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC8.12□□□□□ -1.11
RNF40O75150 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.12□□□□□ -1.11
RNF40O75150 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.12□□□□□ -1.11
RNF40O75150 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.12□□□□□ -1.11
RNF40O75150 ARGFXP2-201ENST00000579304 949 ntBASIC8.12□□□□□ -1.11
RNF40O75150 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.12□□□□□ -1.11
RNF40O75150 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.12□□□□□ -1.11
RNF40O75150 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC8.12□□□□□ -1.11
RNF40O75150 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC8.12□□□□□ -1.11
RNF40O75150 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.12□□□□□ -1.11
RNF40O75150 AC016582.3-206ENST00000636547 207 ntBASIC8.12□□□□□ -1.11
RNF40O75150 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8.12□□□□□ -1.11
RNF40O75150 MAPK10-365ENST00000641902 3825 ntBASIC8.12□□□□□ -1.11
RNF40O75150 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
RNF40O75150 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms