Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 MIR133A2-201ENST00000347538 102 ntBASIC5.67□□□□□ -1.5
PROM1O43490 RNU6-252P-201ENST00000363232 107 ntBASIC5.67□□□□□ -1.5
PROM1O43490 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 RNU6-1263P-201ENST00000384601 106 ntBASIC5.67□□□□□ -1.5
PROM1O43490 SNORD65-201ENST00000391079 73 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AL096800.1-201ENST00000405326 893 ntBASIC5.67□□□□□ -1.5
PROM1O43490 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.67□□□□□ -1.5
PROM1O43490 NMD3P2-201ENST00000421815 761 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 AC046176.1-201ENST00000435260 1170 ntBASIC5.67□□□□□ -1.5
PROM1O43490 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 AC004022.1-201ENST00000447766 1066 ntBASIC5.67□□□□□ -1.5
PROM1O43490 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 RPS4XP6-201ENST00000477670 797 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC092865.4-201ENST00000477936 615 ntBASIC5.67□□□□□ -1.5
PROM1O43490 BET1P1-201ENST00000482276 359 ntBASIC5.67□□□□□ -1.5
PROM1O43490 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 RN7SL101P-201ENST00000496350 279 ntBASIC5.67□□□□□ -1.5
PROM1O43490 SUMO1P1-201ENST00000497904 306 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 MRPS36P3-201ENST00000519284 130 ntBASIC5.67□□□□□ -1.5
PROM1O43490 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 MTCO1P47-201ENST00000523889 1271 ntBASIC5.67□□□□□ -1.5
PROM1O43490 NANOGNBP2-201ENST00000544753 553 ntBASIC5.67□□□□□ -1.5
PROM1O43490 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.67□□□□□ -1.5
PROM1O43490 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.67□□□□□ -1.5
PROM1O43490 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 AC010503.3-201ENST00000594355 540 ntBASIC5.67□□□□□ -1.5
PROM1O43490 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 AC011445.2-201ENST00000599274 173 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC010620.1-201ENST00000601088 1102 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC027243.2-201ENST00000602530 724 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC025857.2-201ENST00000602711 238 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC107952.2-201ENST00000606048 486 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC092266.1-201ENST00000610958 165 ntBASIC5.67□□□□□ -1.5
PROM1O43490 RMST_10.1-201ENST00000616309 154 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC069234.4-201ENST00000621276 412 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AP002782.1-201ENST00000623107 614 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC104985.3-201ENST00000623479 597 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 AC090897.3-201ENST00000636973 1157 ntBASIC5.67□□□□□ -1.5
PROM1O43490 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 CIR1P2-201ENST00000514821 1342 ntBASIC5.67□□□□□ -1.5
PROM1O43490 KARSP1-201ENST00000451871 1752 ntBASIC5.67□□□□□ -1.5
PROM1O43490 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.66□□□□□ -1.5
PROM1O43490 AL359715.3-201ENST00000569267 2123 ntBASIC5.66□□□□□ -1.5
PROM1O43490 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PROM1O43490 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PROM1O43490 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.66□□□□□ -1.5
PROM1O43490 AC015689.2-201ENST00000528172 1738 ntBASIC5.66□□□□□ -1.5
PROM1O43490 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PROM1O43490 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
PROM1O43490 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PROM1O43490 PSG10P-201ENST00000501199 1500 ntBASIC5.66□□□□□ -1.5
PROM1O43490 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.66□□□□□ -1.5
PROM1O43490 COX6B1P3-201ENST00000312310 260 ntBASIC5.66□□□□□ -1.5
PROM1O43490 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PROM1O43490 SNORD1C-201ENST00000363315 78 ntBASIC5.66□□□□□ -1.5
PROM1O43490 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PROM1O43490 MIR130B-202ENST00000385018 82 ntBASIC5.66□□□□□ -1.5
PROM1O43490 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PROM1O43490 U3.23-201ENST00000391132 200 ntBASIC5.66□□□□□ -1.5
PROM1O43490 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PROM1O43490 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.66□□□□□ -1.5
PROM1O43490 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PROM1O43490 AL512422.1-201ENST00000407033 553 ntBASIC5.66□□□□□ -1.5
PROM1O43490 RN7SKP229-201ENST00000410465 302 ntBASIC5.66□□□□□ -1.5
PROM1O43490 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.66□□□□□ -1.5
PROM1O43490 RPL35AP3-201ENST00000414680 288 ntBASIC5.66□□□□□ -1.5
PROM1O43490 AC104843.2-201ENST00000427666 297 ntBASIC5.66□□□□□ -1.5
PROM1O43490 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.66□□□□□ -1.5
PROM1O43490 VN1R108P-201ENST00000431580 830 ntBASIC5.66□□□□□ -1.5
PROM1O43490 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.66□□□□□ -1.5
PROM1O43490 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.66□□□□□ -1.5
PROM1O43490 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PROM1O43490 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PROM1O43490 AL445466.1-201ENST00000448432 357 ntBASIC5.66□□□□□ -1.5
PROM1O43490 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.66□□□□□ -1.5
PROM1O43490 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
PROM1O43490 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms