Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CUX2O14529 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CUX2O14529 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CUX2O14529 AL161912.2-201ENST00000565707 3007 ntBASIC8.68□□□□□ -1.02
CUX2O14529 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CUX2O14529 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CUX2O14529 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
CUX2O14529 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
CUX2O14529 BX323845.1-201ENST00000432417 179 ntBASIC8.68□□□□□ -1.02
CUX2O14529 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC8.68□□□□□ -1.02
CUX2O14529 AC091912.1-201ENST00000511351 248 ntBASIC8.68□□□□□ -1.02
CUX2O14529 RN7SL339P-201ENST00000580597 296 ntBASIC8.68□□□□□ -1.02
CUX2O14529 PRELID3BP3-201ENST00000584963 545 ntBASIC8.68□□□□□ -1.02
CUX2O14529 AC060780.2-201ENST00000589047 198 ntBASIC8.68□□□□□ -1.02
CUX2O14529 AC244107.2-201ENST00000611773 76 ntBASIC8.68□□□□□ -1.02
CUX2O14529 AL356863.1-201ENST00000623378 1080 ntBASIC8.68□□□□□ -1.02
CUX2O14529 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
CUX2O14529 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CUX2O14529 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
CUX2O14529 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC8.68□□□□□ -1.02
CUX2O14529 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CUX2O14529 AC009779.8-201ENST00000641684 4384 ntBASIC8.68□□□□□ -1.02
CUX2O14529 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CUX2O14529 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.67□□□□□ -1.02
CUX2O14529 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CUX2O14529 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
CUX2O14529 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
CUX2O14529 PPIAP31-201ENST00000405422 495 ntBASIC8.67□□□□□ -1.02
CUX2O14529 CRYBB2P1-203ENST00000415709 538 ntBASIC8.67□□□□□ -1.02
CUX2O14529 HYALP1-201ENST00000417674 1279 ntBASIC8.67□□□□□ -1.02
CUX2O14529 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC8.67□□□□□ -1.02
CUX2O14529 RPL7AP52-201ENST00000458096 790 ntBASIC8.67□□□□□ -1.02
CUX2O14529 SCARNA20.4-201ENST00000516969 131 ntBASIC8.67□□□□□ -1.02
CUX2O14529 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
CUX2O14529 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.67□□□□□ -1.02
CUX2O14529 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.67□□□□□ -1.02
CUX2O14529 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.67□□□□□ -1.02
CUX2O14529 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.67□□□□□ -1.02
CUX2O14529 MIR4420-201ENST00000583944 77 ntBASIC8.67□□□□□ -1.02
CUX2O14529 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC8.67□□□□□ -1.02
CUX2O14529 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CUX2O14529 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CUX2O14529 AC021422.1-201ENST00000621212 473 ntBASIC8.67□□□□□ -1.02
CUX2O14529 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.67□□□□□ -1.02
CUX2O14529 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.67□□□□□ -1.02
CUX2O14529 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CUX2O14529 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CUX2O14529 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
CUX2O14529 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
CUX2O14529 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CUX2O14529 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
CUX2O14529 AL355488.2-201ENST00000609909 2850 ntBASIC8.66□□□□□ -1.02
CUX2O14529 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.66□□□□□ -1.02
CUX2O14529 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CUX2O14529 LINC02210-201ENST00000444561 288 ntBASIC8.66□□□□□ -1.02
CUX2O14529 AL133372.1-201ENST00000493565 745 ntBASIC8.66□□□□□ -1.02
CUX2O14529 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC8.66□□□□□ -1.02
CUX2O14529 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.66□□□□□ -1.02
CUX2O14529 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.66□□□□□ -1.02
CUX2O14529 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.66□□□□□ -1.02
CUX2O14529 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.66□□□□□ -1.02
CUX2O14529 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CUX2O14529 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC8.66□□□□□ -1.02
CUX2O14529 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC8.66□□□□□ -1.02
CUX2O14529 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC8.66□□□□□ -1.02
CUX2O14529 AL359715.3-201ENST00000569267 2123 ntBASIC8.66□□□□□ -1.02
CUX2O14529 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CUX2O14529 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CUX2O14529 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.02
CUX2O14529 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.65□□□□□ -1.02
CUX2O14529 TRAV35-201ENST00000390462 330 ntBASIC8.65□□□□□ -1.02
CUX2O14529 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC8.65□□□□□ -1.02
CUX2O14529 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.65□□□□□ -1.02
CUX2O14529 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CUX2O14529 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC8.65□□□□□ -1.02
CUX2O14529 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC8.65□□□□□ -1.02
CUX2O14529 AP001357.1-201ENST00000586304 1053 ntBASIC8.65□□□□□ -1.02
CUX2O14529 AC008739.3-201ENST00000603262 127 ntBASIC8.65□□□□□ -1.02
CUX2O14529 AC009027.1-201ENST00000604510 479 ntBASIC8.65□□□□□ -1.02
CUX2O14529 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CUX2O14529 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CUX2O14529 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
CUX2O14529 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CUX2O14529 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CUX2O14529 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
CUX2O14529 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
CUX2O14529 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.03
CUX2O14529 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CUX2O14529 AL117339.4-201ENST00000608335 7063 ntBASIC8.65□□□□□ -1.03
CUX2O14529 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CUX2O14529 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CUX2O14529 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CUX2O14529 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC8.64□□□□□ -1.03
CUX2O14529 RPS29P10-201ENST00000439197 166 ntBASIC8.64□□□□□ -1.03
CUX2O14529 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.64□□□□□ -1.03
CUX2O14529 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC8.64□□□□□ -1.03
CUX2O14529 RNU1-45P-201ENST00000517191 141 ntBASIC8.64□□□□□ -1.03
CUX2O14529 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CUX2O14529 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC8.64□□□□□ -1.03
CUX2O14529 AC069542.2-201ENST00000624816 216 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 262.4 ms