Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AL358913.1-201ENST00000554342 121 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AL049872.1-201ENST00000556323 322 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AC012414.2-201ENST00000559474 187 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AL118556.2-201ENST00000614375 824 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AC008115.3-201ENST00000614874 549 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AL162233.1-201ENST00000620014 944 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AP001962.1-201ENST00000624114 559 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AL355480.1-201ENST00000629041 99 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 MIR193BHG-214ENST00000641765 509 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC188H7C350 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC188H7C350 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC188H7C350 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
CCDC188H7C350 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 CASC19-221ENST00000641309 1382 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC188H7C350 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CCDC188H7C350 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCDC188H7C350 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
CCDC188H7C350 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC188H7C350 MTCO1P7-201ENST00000419523 1542 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC188H7C350 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC188H7C350 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC188H7C350 OR52B3P-201ENST00000314715 928 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 RNU1-146P-201ENST00000364015 165 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC188H7C350 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC188H7C350 GSTA12P-201ENST00000402398 508 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 OR2AT2P-201ENST00000413438 905 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AL596448.1-201ENST00000415024 392 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 BMS1P17-202ENST00000416720 316 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AC093155.2-201ENST00000420734 937 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 RPL34P3-201ENST00000421454 338 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AC093084.1-201ENST00000424233 687 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AL590623.1-201ENST00000427864 105 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 RSL24D1P8-201ENST00000434442 492 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC104634.1-201ENST00000452720 462 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 RPSAP39-201ENST00000467439 883 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 RN7SL447P-201ENST00000494711 245 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC188H7C350 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC188H7C350 CYCSP22-201ENST00000517555 339 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC188H7C350 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC188H7C350 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC007620.3-201ENST00000608131 497 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC074276.2-201ENST00000619891 348 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AC022106.2-201ENST00000620114 757 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AC015871.5-202ENST00000623252 701 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC188H7C350 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCDC188H7C350 AC073869.7-201ENST00000640874 297 ntBASIC5.4□□□□□ -1.54
CCDC188H7C350 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC188H7C350 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC188H7C350 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
CCDC188H7C350 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
CCDC188H7C350 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CCDC188H7C350 AC107021.2-201ENST00000567714 2095 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC188H7C350 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC188H7C350 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
CCDC188H7C350 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC188H7C350 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 MIR133B-201ENST00000362210 119 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 RNA5SP46-201ENST00000362370 120 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 SNORA27.3-201ENST00000364937 134 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 UBBP2-201ENST00000376781 231 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms