Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL359715.3-201ENST00000569267 2123 ntBASIC5.09□□□□□ -1.59
TMX2-CTNND1H3BSU7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
TMX2-CTNND1H3BSU7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 RN7SKP74-201ENST00000362849 309 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 OR8V1P-201ENST00000395193 873 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 RPA2P2-201ENST00000419698 796 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 UBE2V2P4-201ENST00000447495 259 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 BX284632.1-201ENST00000478218 541 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC083982.1-201ENST00000485679 344 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC007686.1-201ENST00000488511 463 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 GOLGA5P1-201ENST00000507317 980 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 RNA5SP373-201ENST00000517271 95 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC108738.1-201ENST00000603703 237 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC003973.3-201ENST00000624863 2822 ntBASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TMX2-CTNND1H3BSU7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC092747.4-201ENST00000620519 1861 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 TET1P1-201ENST00000426627 2301 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 SNORD56.6-201ENST00000384569 71 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 COX5BP7-201ENST00000414780 274 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 PA2G4P6-201ENST00000438325 1197 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 RPL31P44-201ENST00000447680 377 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC090804.1-201ENST00000448870 490 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC016559.2-201ENST00000510759 359 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC005000.1-201ENST00000536192 288 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AP002373.2-201ENST00000541631 1060 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC093799.2-201ENST00000610062 578 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL450345.1-202ENST00000605741 3881 ntBASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.07□□□□□ -1.6
TMX2-CTNND1H3BSU7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 SNURFL-201ENST00000309296 343 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 DBIP1-201ENST00000401435 260 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 Z97832.1-201ENST00000402490 328 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 OR4K12P-201ENST00000406538 961 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 RPSAP35-201ENST00000413753 818 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms