Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC067904.2-201ENST00000517322 1283 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008147.3-201ENST00000548666 354 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC022404.1-201ENST00000555320 273 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC022022.2-201ENST00000602989 360 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 Z99289.3-201ENST00000605586 594 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AL512427.1-201ENST00000618593 349 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 MIR6861-201ENST00000618657 64 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC006963.1-201ENST00000624003 1052 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC132825.7-201ENST00000638744 335 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AP002833.3-201ENST00000625075 2265 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 CR788268.1-201ENST00000603931 1809 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF29P-201ENST00000225587 168 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 RNY3P9-201ENST00000384727 106 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 XKRYP1-201ENST00000423438 492 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 XKRYP2-201ENST00000432915 492 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 RAB28P3-201ENST00000448325 597 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 EXOSC3P1-201ENST00000448649 500 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 RPL7P55-201ENST00000450522 746 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 HMGB1P26-201ENST00000452520 628 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC023141.9-201ENST00000458734 412 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 SNORD11.1-201ENST00000459482 85 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC082651.2-201ENST00000496833 166 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 RN7SL466P-201ENST00000497546 295 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC016559.2-201ENST00000510759 359 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 SCARNA16.4-201ENST00000516956 187 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC004923.2-201ENST00000529649 369 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AL132857.1-201ENST00000555180 708 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 MTCYBP13-201ENST00000578634 1093 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC107993.1-201ENST00000591343 684 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AL606834.3-201ENST00000602615 496 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 OR7A19P-201ENST00000608051 733 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC021851.1-201ENST00000608537 1082 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC084782.3-201ENST00000612282 578 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AL359513.1-201ENST00000614364 557 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC109583.2-201ENST00000617367 129 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC090617.9-201ENST00000623751 147 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 FRG1DP-201ENST00000635586 771 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF402P-201ENST00000404435 3100 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 AC079298.1-201ENST00000625026 1619 ntBASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV5S1A1TA0A578 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms