Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SKP269-201ENST00000365545 319 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 RNU6-317P-201ENST00000384031 107 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AL031663.1-201ENST00000437445 219 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 MRPL35P2-201ENST00000448009 511 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC011411.1-201ENST00000509592 876 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC104417.1-201ENST00000523974 751 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC006518.2-201ENST00000542513 940 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC006530.1-201ENST00000555980 571 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AL356801.1-201ENST00000559320 294 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC007346.2-201ENST00000564816 892 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 ZNF322P1-201ENST00000568013 1209 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC005377.1-201ENST00000605126 456 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC015726.3-201ENST00000624501 418 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AL133268.1-201ENST00000405676 1401 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AL161756.3-201ENST00000641216 2071 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 RNF6P1-201ENST00000444889 1784 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 RNU6-1339P-201ENST00000363574 91 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 OR52E6-202ENST00000379946 954 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 RNU6-549P-201ENST00000384433 107 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 RNA5SP284-201ENST00000384547 118 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AL031985.1-201ENST00000392713 418 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 ANAPC10P1-201ENST00000395991 556 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AC092638.1-201ENST00000411966 1275 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 RPS4XP5-201ENST00000419038 768 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 NAP1L4P2-201ENST00000425958 899 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 RPL12P16-201ENST00000431098 498 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 YWHAEP5-201ENST00000431545 765 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AC073410.1-201ENST00000435125 589 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AL663074.2-201ENST00000440621 479 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 EXOSC3P1-201ENST00000448649 500 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AC008837.1-201ENST00000511513 412 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AC119751.1-201ENST00000513357 765 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 PRELID3BP4-201ENST00000515476 571 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 IGKV3D-34-201ENST00000522638 302 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 MTCYBP23-201ENST00000558717 1102 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AC068714.1-201ENST00000559623 800 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 MTCO2P2-201ENST00000591258 225 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 AP001267.4-201ENST00000602598 545 ntBASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A3BPQ9Y5P4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms