Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC092642.1-201ENST00000392417 425 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AL391361.1-201ENST00000405580 489 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 MIR1286-201ENST00000408112 78 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 RN7SKP199-201ENST00000410325 305 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 Z68694.1-201ENST00000413929 841 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC079355.1-201ENST00000421770 223 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AP000942.1-201ENST00000463969 747 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC022795.1-201ENST00000473808 480 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 RPL7P41-201ENST00000485823 957 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC024558.1-201ENST00000505008 528 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC073358.1-201ENST00000505671 684 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 PGAM1P13-201ENST00000507497 754 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC006427.1-201ENST00000514359 712 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC012400.1-201ENST00000518452 381 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC105031.1-201ENST00000518550 476 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC069307.1-201ENST00000602820 447 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 RNF138P2-201ENST00000603490 592 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 IMMP1LP3-201ENST00000604197 224 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC092747.4-201ENST00000620519 1861 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC006210.2-201ENST00000367074 1545 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC112198.2-201ENST00000426589 6996 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 RNU1-74P-201ENST00000384108 171 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 NUDT19P3-201ENST00000404698 555 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 MARK2P12-201ENST00000420129 585 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC108075.1-201ENST00000424692 529 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 CLUHP1-201ENST00000435012 1190 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 GAPDHP58-201ENST00000438477 1006 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC104634.1-201ENST00000452720 462 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 SEPT7P3-201ENST00000455017 621 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC112206.1-201ENST00000468416 477 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 RN7SL189P-201ENST00000468631 289 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 HMGB1P19-201ENST00000517578 577 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC095055.1-201ENST00000603472 1113 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AL512329.2-201ENST00000607350 548 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 SNORD91B-202ENST00000608459 222 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AP000864.1-201ENST00000609424 650 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC022467.1-201ENST00000614738 749 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC090527.3-201ENST00000619041 548 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 MTCO1P1-201ENST00000624263 1081 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC135068.12-201ENST00000637370 931 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC132825.8-201ENST00000640783 297 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AL596275.2-204ENST00000641628 552 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AL596275.2-206ENST00000641957 626 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 AL450345.1-202ENST00000605741 3881 ntBASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAPPC4Q9Y296 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms