Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF6Q9Y252 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RNF6Q9Y252 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5□□□□□ -1.61
RNF6Q9Y252 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC026523.2-201ENST00000625039 7739 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC245100.2-201ENST00000454544 1679 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC020633.1-201ENST00000468439 2247 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 RNA5SP507-201ENST00000363603 121 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AL691447.1-201ENST00000419456 387 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 PTP4A1P1-201ENST00000420539 515 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 MTCO1P51-201ENST00000427672 1060 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 RN7SL329P-201ENST00000467740 299 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 RPS21P4-201ENST00000487122 248 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 RPS23P1-201ENST00000491662 432 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 PGAM1P13-201ENST00000507497 754 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC147055.3-201ENST00000510547 851 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 OR8G3P-201ENST00000533406 921 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 OR11H3P-201ENST00000554547 982 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 MIR4700-201ENST00000578311 74 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC117490.2-201ENST00000610042 594 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 Z95327.3-201ENST00000610385 572 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 AL121612.2-201ENST00000612261 482 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 BNIP3P41-202ENST00000616656 861 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC135068.5-201ENST00000624197 983 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF6Q9Y252 AC004817.4-201ENST00000602396 3625 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.99□□□□□ -1.61
RNF6Q9Y252 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF6Q9Y252 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC008079.2-201ENST00000623543 20396 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC000374.1-201ENST00000434698 1745 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 LINC01963-201ENST00000562038 3148 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF6Q9Y252 RNA5SP183-201ENST00000362452 119 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 RN7SKP74-201ENST00000362849 309 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF6Q9Y252 AL645927.1-201ENST00000396783 406 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 EI24P3-201ENST00000399046 1062 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 SEPT7P8-201ENST00000413308 775 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 RPL23AP27-201ENST00000415161 451 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 ARAFP1-201ENST00000422172 605 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 RPS12P31-201ENST00000491419 398 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 RPL15P21-201ENST00000495592 567 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC072052.1-201ENST00000496556 306 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC231760.1-201ENST00000498002 260 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 TRAV11-201ENST00000539512 339 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 HMGN2P6-201ENST00000551091 273 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF6Q9Y252 AC012616.1-201ENST00000600294 197 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 AL136295.6-201ENST00000610486 658 ntBASIC4.98□□□□□ -1.61
RNF6Q9Y252 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms