Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 RNU1-146P-201ENST00000364015 165 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 MIR585-201ENST00000384887 94 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 MIR550A3-201ENST00000390735 95 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 HSPA8P15-201ENST00000401676 786 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AL589647.1-201ENST00000402485 466 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 SEPT7P8-201ENST00000413308 775 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AL590762.4-201ENST00000425885 253 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AL772161.1-201ENST00000439130 476 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 RPL7P61-201ENST00000451721 751 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 OR7L1P-201ENST00000456181 380 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 SEPT7P6-201ENST00000469999 1143 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC109462.1-201ENST00000491087 368 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC015864.1-201ENST00000496512 544 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC109464.1-201ENST00000511091 819 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 RN7SKP34-201ENST00000516142 244 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AP004607.2-201ENST00000533949 322 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC127381.1-201ENST00000555979 939 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC006116.3-201ENST00000592968 361 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC138473.1-201ENST00000605717 526 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AL356608.1-201ENST00000610034 820 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 Mico1.1-201ENST00000611698 204 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AL162574.1-201ENST00000615702 950 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC019072.1-201ENST00000604535 1551 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC006206.1-201ENST00000544842 3387 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 RNA5SP305-201ENST00000362665 119 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 RNA5SP487-201ENST00000410186 122 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC093162.1-201ENST00000419682 124 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 RPL12P17-201ENST00000432393 498 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 GAPDHP25-201ENST00000447061 1001 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC073850.1-201ENST00000449243 255 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 RBMY2TP-201ENST00000451162 947 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 RPL5P22-201ENST00000480199 884 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 FTH1P11-201ENST00000517577 551 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AP000859.1-201ENST00000525536 307 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 MIR4646-201ENST00000580775 63 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC009303.3-201ENST00000591103 736 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AP001542.1-201ENST00000591314 200 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC005229.3-201ENST00000603438 323 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 TAS2R6P-201ENST00000605022 826 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC015660.5-201ENST00000623238 564 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AP002799.1-201ENST00000623552 423 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC114947.2-201ENST00000565748 2125 ntBASIC4.88□□□□□ -1.63
NPIPA1Q9UND3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms