Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 RNA5SP345-201ENST00000410646 108 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 RPL35AP21-201ENST00000437667 333 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC006466.1-201ENST00000438721 289 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AL137845.2-201ENST00000444292 988 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 MRPL35P2-201ENST00000448009 511 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 BTF3P6-201ENST00000448054 499 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 GAPDHP56-201ENST00000506031 988 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC138832.1-201ENST00000522871 556 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 TVP23CP2-201ENST00000571473 623 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC087821.1-201ENST00000623639 567 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 FRG1EP-201ENST00000634469 770 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC018628.1-201ENST00000624147 3819 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC011447.7-201ENST00000624228 1590 ntBASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.76□□□□□ -1.33
NPC1L1Q9UHC9 AC004817.4-201ENST00000602396 3625 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 AC068446.1-201ENST00000556425 1549 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 RNA5SP123-201ENST00000363244 119 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 RNA5SP187-201ENST00000384400 119 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 FABP12P1-201ENST00000401911 322 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 CHEK2P3-201ENST00000416118 248 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 AC092017.2-201ENST00000427600 362 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 SCAND3P1-201ENST00000439854 1060 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 SERPINA7P1-201ENST00000443077 631 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 AC007686.1-201ENST00000488511 463 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 AC087783.2-201ENST00000605070 562 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 FAM25E-202ENST00000608562 189 ntBASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPC1L1Q9UHC9 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 AF186996.5-201ENST00000418098 904 ntBASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 AC007559.1-201ENST00000428736 355 ntBASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 RPL21P133-201ENST00000443666 476 ntBASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 MIR4480-201ENST00000582492 71 ntBASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 AC091953.3-201ENST00000623220 236 ntBASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 DHX9P1-201ENST00000436565 3076 ntBASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPC1L1Q9UHC9 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPC1L1Q9UHC9 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.73□□□□□ -1.33
NPC1L1Q9UHC9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPC1L1Q9UHC9 MAPK10-263ENST00000641052 4307 ntBASIC6.73□□□□□ -1.33
NPC1L1Q9UHC9 SNORA70.10-201ENST00000384515 134 ntBASIC6.73□□□□□ -1.33
NPC1L1Q9UHC9 AL021331.1-201ENST00000402817 582 ntBASIC6.73□□□□□ -1.33
NPC1L1Q9UHC9 OR2AM1P-201ENST00000422137 422 ntBASIC6.73□□□□□ -1.33
NPC1L1Q9UHC9 MGAT2P2-201ENST00000427194 797 ntBASIC6.73□□□□□ -1.33
NPC1L1Q9UHC9 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms