Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 MIR6839-201ENST00000620425 113 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 HPVC1-201ENST00000629899 1198 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 AL049767.1-202ENST00000637826 242 ntBASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
BLOC1S4Q9NUP1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC125336.1-201ENST00000508893 2827 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 U3.2-201ENST00000362981 210 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 RN7SKP160-201ENST00000363804 340 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 SNORD115-48-201ENST00000364764 76 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 OR1L6-202ENST00000373684 1044 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 RPL35AP24-201ENST00000413846 330 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC079809.1-201ENST00000415468 276 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 HYALP1-201ENST00000417674 1279 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AL133325.1-201ENST00000421090 382 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 FAR1P1-201ENST00000427163 934 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AL500527.1-201ENST00000448532 255 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC007688.1-201ENST00000475592 759 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 RPS24P16-201ENST00000497294 392 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 PGAM1P13-201ENST00000507497 754 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC011411.1-201ENST00000509592 876 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC106730.2-201ENST00000566641 540 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 AC011626.1-201ENST00000604710 562 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF733P-202ENST00000444809 1573 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 HSPA8P17-201ENST00000427029 1382 ntBASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BLOC1S4Q9NUP1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 NLRP3P1-201ENST00000622303 1785 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 RN7SKP162-201ENST00000363605 345 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 CFL1P1-202ENST00000432948 411 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC079168.1-201ENST00000458741 345 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 CR383656.1-201ENST00000484916 377 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 RN7SL447P-201ENST00000494711 245 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 SUMO1P1-201ENST00000497904 306 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC016559.2-201ENST00000510759 359 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC026688.1-201ENST00000520639 1168 ntBASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.91□□□□□ -1.46
BLOC1S4Q9NUP1 FKBP1AP1-201ENST00000594588 318 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms