Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 MTND4P31-201ENST00000425607 1343 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL355852.1-201ENST00000454081 1771 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC017007.4-201ENST00000503353 1352 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 STAG3L4-201ENST00000352103 530 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 RNU6-1119P-201ENST00000384349 108 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 RNA5SP251-201ENST00000410614 137 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 Z82198.3-201ENST00000421145 199 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC013403.1-201ENST00000436954 263 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 RBMX2P4-201ENST00000441256 376 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 COL11A2P1-205ENST00000441798 676 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL671855.1-201ENST00000446875 1203 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL050341.1-201ENST00000447743 313 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 KF459542.1-201ENST00000450908 553 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 ZNF114P1-201ENST00000453500 292 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC011979.1-201ENST00000472300 483 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC104763.1-201ENST00000475274 360 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC021006.1-201ENST00000489849 553 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC104971.1-201ENST00000495117 578 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 ARL4AP1-201ENST00000503220 705 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 RN7SKP67-201ENST00000515905 235 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 SNORA31.13-201ENST00000516624 135 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 KCTD9P4-201ENST00000526766 1166 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 EEF1B2P4-201ENST00000551398 348 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AP005205.1-201ENST00000563503 508 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 ROCK1P1-201ENST00000573767 549 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 MIR5708-201ENST00000579723 85 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC134669.1-201ENST00000581275 672 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 MIR548S-201ENST00000581352 82 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC091135.1-201ENST00000585943 307 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC083760.1-201ENST00000589621 670 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL606834.2-201ENST00000602954 668 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC019257.2-201ENST00000605539 497 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AF250324.2-201ENST00000608299 610 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC100793.4-201ENST00000613683 429 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC008083.4-201ENST00000615076 444 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC244100.4-201ENST00000617747 388 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC093648.1-201ENST00000623546 606 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 SAMMSON-209ENST00000641222 1100 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 AC105235.1-201ENST00000623208 1816 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 MARK2P4-201ENST00000503381 2380 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 SAGE3P-201ENST00000619800 1635 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.73□□□□□ -1.49
SEC61A2Q9H9S3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms