Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 MIR191-201ENST00000384873 92 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC007068.1-201ENST00000396690 844 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 QRSL1P2-201ENST00000418582 964 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 LINC00328-2P-201ENST00000436585 219 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 KF459542.1-201ENST00000450908 553 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC104634.1-201ENST00000452720 462 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AL356390.1-201ENST00000455684 397 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 RN7SL517P-201ENST00000462240 305 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 RPL7P40-201ENST00000481703 745 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC005479.3-201ENST00000602790 431 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AC234782.5-201ENST00000617723 324 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 AL672167.1-205ENST00000641112 3080 ntBASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VIPAS39Q9H9C1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 YES1P1-201ENST00000418510 1628 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 MTHFD2P5-201ENST00000320415 844 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 SUGT1P2-201ENST00000379452 992 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 SNORA2.3-201ENST00000383920 135 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 MIR1203-201ENST00000408812 85 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 VDAC1P9-201ENST00000412766 841 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AL133173.1-201ENST00000423458 397 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AL645937.3-201ENST00000453647 936 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 RN7SL612P-201ENST00000497704 295 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 RFPL4AP3-201ENST00000515267 345 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 IGBP1P1-201ENST00000554337 1009 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 MIR744-201ENST00000578242 98 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 AP005432.2-201ENST00000608162 586 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 uc_338.31-201ENST00000615595 186 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 TMEM30CP-203ENST00000637814 1035 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 OR8G3P-202ENST00000641572 1255 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 CDC27P2-201ENST00000425026 1922 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 CASC19-204ENST00000641001 2055 ntBASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VIPAS39Q9H9C1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 AC011503.2-201ENST00000594230 1500 ntBASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 NEAT1-202ENST00000501122 22743 ntBASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 RNA5SP273-201ENST00000362484 113 ntBASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 HDGFP1-201ENST00000405943 252 ntBASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 U3.35-201ENST00000408405 208 ntBASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 CDY17P-201ENST00000414121 1282 ntBASIC5.18□□□□□ -1.58
VIPAS39Q9H9C1 RAB9AP4-201ENST00000415230 609 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms