Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC006065.1-201ENST00000422539 802 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 RPL7AP14-201ENST00000424041 802 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 RPSAP65-201ENST00000429660 595 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 RPS29P14-201ENST00000431518 171 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC007679.3-201ENST00000434035 414 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 Z84478.1-201ENST00000438230 1219 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 OR3D1P-201ENST00000438288 955 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 MTCYBP12-201ENST00000440559 1134 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 SEPT14P24-201ENST00000447236 180 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC011037.1-201ENST00000483964 558 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 PDCL3P4-201ENST00000489621 720 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 RPS26P24-201ENST00000497656 331 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC008837.1-201ENST00000511513 412 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 ZNF519P4-201ENST00000514008 125 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 RFPL4AP3-201ENST00000515267 345 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC078899.1-201ENST00000521432 1185 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC036111.2-201ENST00000533247 901 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC002519.2-203ENST00000567043 837 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 ZNF322P1-201ENST00000568013 1209 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC090826.1-203ENST00000569235 490 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 PIGPP4-201ENST00000584447 307 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC010503.3-201ENST00000594355 540 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AP001823.1-201ENST00000604056 1003 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC012557.2-201ENST00000605919 418 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AL138478.1-201ENST00000612252 832 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 MIR3974-201ENST00000637126 96 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC011933.2-201ENST00000578539 2790 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 ANKRD36P1-201ENST00000344424 659 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 OR5H2-201ENST00000355273 945 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 OR10R3P-201ENST00000361688 942 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 RNU6-1214P-201ENST00000363650 109 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 FCF1P5-201ENST00000406490 482 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 CBX1P3-201ENST00000413296 527 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 MORF4L1P6-201ENST00000418771 268 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 OR5W1P-201ENST00000423705 938 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 RPS4XP16-201ENST00000427198 791 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AL035458.1-201ENST00000433096 585 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms