Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC005412.2-201ENST00000492004 341 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AC012400.1-201ENST00000518452 381 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AC074101.1-201ENST00000637861 241 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AC112255.1-201ENST00000624070 2493 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 ZNF733P-202ENST00000444809 1573 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 RPS4XP16-201ENST00000427198 791 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 RPL7P61-201ENST00000451721 751 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AURKAPS1-201ENST00000451805 1212 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 RPS29P22-201ENST00000472363 168 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC006463.2-201ENST00000473326 348 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC072052.1-201ENST00000496556 306 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC087763.1-201ENST00000603391 286 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 AC073869.10-201ENST00000642016 354 ntBASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.11□□□□□ -1.43
UPF3BQ9BZI7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 SNORA67-201ENST00000384423 137 ntBASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 AC211486.3-201ENST00000412694 621 ntBASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 AL807761.1-201ENST00000417622 171 ntBASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 Z92846.1-201ENST00000456203 268 ntBASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 RPS4XP20-201ENST00000505751 772 ntBASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 PGAM1P13-201ENST00000507497 754 ntBASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 AC134349.2-201ENST00000535136 910 ntBASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 AC006349.1-201ENST00000555526 235 ntBASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
UPF3BQ9BZI7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 RNA5SP183-201ENST00000362452 119 ntBASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 FAR2P2-201ENST00000413041 594 ntBASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 FAR2P4-202ENST00000425399 584 ntBASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 BX323845.1-201ENST00000432417 179 ntBASIC6.09□□□□□ -1.43
UPF3BQ9BZI7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms