Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 RNU1-94P-201ENST00000362627 173 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 PPIAP31-201ENST00000405422 495 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 U3.35-201ENST00000408405 208 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL500522.2-201ENST00000448562 343 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AC016550.3-201ENST00000515706 767 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL023881.1-201ENST00000621088 301 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AC090506.2-201ENST00000624521 419 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 MAPK10-338ENST00000641647 3362 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 RNU1-130P-201ENST00000363930 160 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AC079168.2-201ENST00000453977 416 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL158152.1-201ENST00000602652 1435 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL592148.3-201ENST00000608771 2646 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 SNORA66-201ENST00000384792 133 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 MIR659-201ENST00000384963 97 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL136116.2-201ENST00000404020 785 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AC093578.1-201ENST00000415219 368 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL356276.2-201ENST00000435919 558 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AC019322.1-201ENST00000571869 389 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 H3F3BP2-201ENST00000583907 357 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 MIR4420-201ENST00000583944 77 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AC009027.1-201ENST00000604510 479 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AL442639.1-201ENST00000625030 1899 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 OR9K1P-202ENST00000641111 3217 ntBASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CSMD1Q96PZ7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 SPRR2C-201ENST00000290702 219 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 MIR634-201ENST00000385208 97 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 OR8V1P-201ENST00000395193 873 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 NDUFB4P4-201ENST00000404822 243 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 RPS29P17-201ENST00000430795 166 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 AC060780.2-201ENST00000589047 198 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 AL160281.1-201ENST00000605307 311 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 AC100847.1-201ENST00000611316 481 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 UQCRHP4-201ENST00000471686 272 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms