Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 BZW1P1-201ENST00000454901 1240 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 SNRPGP9-201ENST00000456025 225 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC072039.1-201ENST00000477611 581 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC093870.1-201ENST00000506837 213 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC138517.1-201ENST00000515724 568 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC008429.2-201ENST00000523057 864 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AP001000.1-201ENST00000526843 742 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC026956.1-201ENST00000558741 396 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 NIFKP8-201ENST00000560500 874 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AL606834.2-201ENST00000602954 668 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC083899.3-201ENST00000603413 594 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC011451.2-201ENST00000604303 598 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC116651.1-201ENST00000609724 556 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AL159169.2-201ENST00000610061 1269 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC073488.9-201ENST00000631601 754 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC087565.3-203ENST00000641018 837 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC004520.1-201ENST00000608362 1413 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 MAPK10-357ENST00000641831 2858 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AL121657.1-201ENST00000327215 531 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 MTND1P21-201ENST00000412991 285 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 CBX1P3-201ENST00000413296 527 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 TCEA1P4-201ENST00000415066 844 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AL359092.1-201ENST00000417156 265 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC019050.1-201ENST00000418508 492 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC128677.1-201ENST00000436016 442 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 TRIM60P18-201ENST00000441518 828 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC245291.3-201ENST00000443400 292 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC023271.1-201ENST00000445936 1090 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 ST13P20-201ENST00000447996 1065 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 RPL5P24-201ENST00000463742 885 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC044810.1-201ENST00000480271 711 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 RPL19P11-201ENST00000495944 589 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC104685.1-201ENST00000502445 371 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 BNIP3P41-201ENST00000503774 571 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 GTF2F2P1-201ENST00000511083 675 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC037479.1-201ENST00000558361 625 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 RN7SL208P-201ENST00000577964 296 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AP000403.1-201ENST00000603349 851 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 NDUFA8P1-201ENST00000605525 367 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms