Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-CQ95604 RBM6-203ENST00000421682 684 ntTSL 2 BASIC7.73□□□□□ -1.17
HLA-CQ95604 EEF1GP7-201ENST00000422983 703 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 SPATA20P1-201ENST00000423089 438 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AL358176.2-201ENST00000425769 204 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 HMGB1P18-201ENST00000438801 619 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC245291.3-201ENST00000443400 292 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 MRPS17P3-201ENST00000465453 385 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-CQ95604 RPL7P39-201ENST00000481157 744 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AL163540.1-201ENST00000485382 386 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 AL035404.1-201ENST00000497982 568 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.73□□□□□ -1.17
HLA-CQ95604 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.73□□□□□ -1.17
HLA-CQ95604 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 SERPINA15P-201ENST00000529287 266 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 TOMM20P1-201ENST00000534518 427 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC023050.3-201ENST00000541142 333 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC018630.1-201ENST00000541376 925 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC008083.2-201ENST00000546707 476 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC079598.4-201ENST00000549647 265 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC079363.1-201ENST00000551366 1125 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-CQ95604 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-CQ95604 AC019322.1-201ENST00000571869 389 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 MIR4428-201ENST00000584884 73 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-CQ95604 RN7SL715P-201ENST00000606972 286 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 MIR6862-1-201ENST00000613016 70 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC243773.3-201ENST00000613270 256 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 MIR6862-2-201ENST00000614755 70 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 MIR6071-201ENST00000616741 78 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 AC073488.8-201ENST00000631952 757 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
HLA-CQ95604 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.73□□□□□ -1.17
HLA-CQ95604 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 OR11H5P-202ENST00000641612 1325 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 AC105046.1-201ENST00000566457 4997 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 AC096992.2-201ENST00000609553 1684 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-CQ95604 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 HERC2P8-202ENST00000564334 3705 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AC073349.2-201ENST00000427545 1603 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 RNU6-1318P-201ENST00000365389 103 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 Y_RNA.579-201ENST00000390939 94 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 AL136133.1-201ENST00000413694 376 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AC016769.2-201ENST00000414815 475 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 AL596448.1-201ENST00000415024 392 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 LSM1P1-201ENST00000438629 273 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 AC114755.4-201ENST00000439114 443 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.72□□□□□ -1.17
HLA-CQ95604 RPL38P4-201ENST00000502376 214 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 DCAF13P2-201ENST00000514188 555 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.72□□□□□ -1.17
HLA-CQ95604 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms