Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC018552.1-201ENST00000562099 811 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 MIR4505-201ENST00000582238 73 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 TAS2R6P-201ENST00000605022 826 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AP005131.7-201ENST00000610087 611 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 AC135068.12-201ENST00000637370 931 ntBASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUDCD3Q8IVD9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AL513548.1-201ENST00000562904 1724 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 OR55B1P-203ENST00000641518 2602 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 RNA5SP335-201ENST00000363817 110 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 SNORA2.3-201ENST00000383920 135 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 VDAC2P1-201ENST00000399358 958 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 RPS26P4-201ENST00000431743 355 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AL591623.2-201ENST00000449978 222 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 SIAH1P1-201ENST00000479411 923 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 ENPP7P9-201ENST00000514456 627 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 RN7SKP70-201ENST00000516655 271 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 RNU6-943P-201ENST00000516960 98 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 MTND2P17-201ENST00000550281 688 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AC116553.2-201ENST00000564203 463 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 RPL10P14-201ENST00000565265 298 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AC134669.1-201ENST00000581275 672 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AP002884.5-201ENST00000595053 1132 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 AL499605.1-201ENST00000604628 403 ntBASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NUDCD3Q8IVD9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 U3.3-201ENST00000362986 216 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 RN7SKP125-201ENST00000410481 302 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 TMBIM7P-201ENST00000418074 855 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AL390119.1-201ENST00000440329 312 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 PCNPP2-201ENST00000441651 455 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 RN7SL443P-201ENST00000464331 290 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC112206.1-201ENST00000468416 477 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC090686.1-201ENST00000481577 749 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 PFN1P8-201ENST00000497012 543 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC073358.1-201ENST00000505671 684 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AL049830.4-201ENST00000555149 351 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC010547.6-201ENST00000571789 193 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC021242.1-201ENST00000507315 2035 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 BTBD10P1-201ENST00000549824 1352 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms