Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MIR1910-201ENST00000636955 80 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC099654.3-201ENST00000447087 1546 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC017002.4-201ENST00000604721 1525 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC011933.2-201ENST00000578539 2790 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VRK3Q8IV63 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
VRK3Q8IV63 AP004607.3-201ENST00000530354 3915 ntBASIC5.71□□□□□ -1.49
VRK3Q8IV63 AC095050.2-201ENST00000510748 1458 ntBASIC5.71□□□□□ -1.49
VRK3Q8IV63 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VRK3Q8IV63 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VRK3Q8IV63 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK3Q8IV63 PDZK1P1-202ENST00000425209 1350 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK3Q8IV63 Y_RNA.194-201ENST00000363985 102 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 RNU4-68P-201ENST00000364314 141 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK3Q8IV63 MIR621-201ENST00000384919 96 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 RNU6-316P-201ENST00000391027 107 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 SFR1P1-201ENST00000403720 688 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 NUDT19P3-201ENST00000404698 555 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC126120.1-201ENST00000431082 470 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL590399.4-201ENST00000436561 601 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC096775.1-201ENST00000437724 448 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL008629.1-201ENST00000438615 184 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 ARL5AP3-201ENST00000439327 386 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC015983.1-201ENST00000441577 373 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 RPS3AP43-201ENST00000479743 781 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 FABP5P6-201ENST00000510588 409 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 RNU6-1129P-201ENST00000515964 104 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 OR4A2P-201ENST00000527276 913 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL035411.2-201ENST00000604022 421 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL365181.4-201ENST00000609800 547 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC090617.9-201ENST00000623751 147 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC129778.1-202ENST00000623812 261 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC018628.1-201ENST00000624147 3819 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AL591379.1-207ENST00000635982 261 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC103706.2-201ENST00000638080 240 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VRK3Q8IV63 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC104446.1-201ENST00000613728 1321 ntBASIC5.71□□□□□ -1.5
VRK3Q8IV63 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VRK3Q8IV63 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK3Q8IV63 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK3Q8IV63 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK3Q8IV63 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK3Q8IV63 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK3Q8IV63 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK3Q8IV63 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
VRK3Q8IV63 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.7□□□□□ -1.5
VRK3Q8IV63 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK3Q8IV63 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VRK3Q8IV63 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK3Q8IV63 RAB5CP1-201ENST00000395972 580 ntBASIC5.7□□□□□ -1.5
VRK3Q8IV63 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms