Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 RN7SL290P-201ENST00000578661 300 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 MIR3614-201ENST00000581261 86 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AL121652.1-201ENST00000608851 448 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC009464.1-201ENST00000615731 469 ntBASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.35□□□□□ -1.55
ZNF549Q6P9A3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC110792.3-201ENST00000595906 1614 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 RNA5SP241-201ENST00000391326 114 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AL031985.1-201ENST00000392713 418 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 ANAPC10P1-201ENST00000395991 556 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AL356057.1-202ENST00000402263 756 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 NPM1P37-201ENST00000403105 874 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 OR4K12P-201ENST00000406538 961 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 CDY17P-201ENST00000414121 1282 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 HYALP1-201ENST00000417674 1279 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AJ239321.1-201ENST00000424255 564 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC012075.1-201ENST00000436549 580 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 CYCSP51-201ENST00000443545 318 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 DEFB109A-201ENST00000482450 265 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC058823.1-201ENST00000485315 474 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 RPL15P21-201ENST00000495592 567 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 PRELID3BP6-201ENST00000503839 571 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 CDC42P3-201ENST00000518493 633 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC034205.1-201ENST00000520621 638 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC023538.1-201ENST00000534576 736 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC068620.3-201ENST00000602749 560 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 FO393422.1-201ENST00000603908 708 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC000068.2-201ENST00000608816 460 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AP003400.3-201ENST00000624904 346 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 AC132825.8-201ENST00000640783 297 ntBASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ZNF549Q6P9A3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ZNF549Q6P9A3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.34□□□□□ -1.56
ZNF549Q6P9A3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 TMSB4XP4-201ENST00000323496 618 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 SDHDP6-201ENST00000414693 480 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL121882.1-201ENST00000422893 417 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms