Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 RNA5SP362-201ENST00000516048 118 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC100784.1-201ENST00000522790 310 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 RN7SL356P-201ENST00000582228 248 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC009027.1-201ENST00000604510 479 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC010245.2-201ENST00000606908 1167 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC000068.2-201ENST00000608816 460 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC109583.2-201ENST00000617367 129 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AP003400.3-201ENST00000624904 346 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AL049767.1-202ENST00000637826 242 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AC093775.1-201ENST00000624154 1868 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 AL353796.1-201ENST00000561542 3241 ntBASIC4.83□□□□□ -1.64
NIPAL3Q6P499 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NIPAL3Q6P499 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 NXF4-202ENST00000416098 1465 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 HSPA8P17-201ENST00000427029 1382 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 TCP11X1-202ENST00000622971 1372 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AL391422.1-201ENST00000402155 436 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 GABARAPL3-201ENST00000412799 354 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 NAP1L4P2-201ENST00000425958 899 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AL157884.3-201ENST00000448273 1184 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AL672138.1-201ENST00000450604 1015 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AL035090.1-201ENST00000454835 332 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 RPL7AP10-201ENST00000481016 791 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 RN7SL547P-201ENST00000490793 290 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 HMGB1P44-201ENST00000508597 572 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC022360.1-201ENST00000521058 340 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC022784.5-201ENST00000522241 437 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC011445.2-201ENST00000599274 173 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 BNIP3P7-201ENST00000605641 516 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AC019131.2-201ENST00000609071 870 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 SAMMSON-227ENST00000642114 1199 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.82□□□□□ -1.64
NIPAL3Q6P499 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.82□□□□□ -1.64
NIPAL3Q6P499 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.81□□□□□ -1.64
NIPAL3Q6P499 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NIPAL3Q6P499 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NIPAL3Q6P499 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.81□□□□□ -1.64
NIPAL3Q6P499 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NIPAL3Q6P499 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NIPAL3Q6P499 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NIPAL3Q6P499 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NIPAL3Q6P499 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms