Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNA5SP514-201ENST00000363717 111 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 RN7SKP151-201ENST00000410230 316 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 RN7SKP97-201ENST00000410966 333 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MTCO2P21-201ENST00000419780 677 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AL035660.1-201ENST00000422041 222 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 GTF2IP2-201ENST00000424290 697 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 USP24P1-201ENST00000433802 779 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC073052.1-201ENST00000440417 714 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 TRIM60P16-201ENST00000444048 694 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 GAPDHP23-201ENST00000444823 993 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 RPL36AP39-201ENST00000445859 318 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 CASP3P1-201ENST00000446037 609 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 RN7SL177P-201ENST00000476596 299 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 RN7SL717P-201ENST00000478343 297 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MTND4LP2-201ENST00000502312 285 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 EIF4A2P5-201ENST00000529914 499 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC023824.3-201ENST00000569003 562 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 GARSP1-201ENST00000570895 719 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 CCDC58P3-201ENST00000590792 430 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC008555.7-201ENST00000605008 583 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 FAM72A-208ENST00000607379 1139 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AL512624.1-201ENST00000613638 469 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MIR7973-1-201ENST00000614683 76 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC006386.1-201ENST00000619436 415 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC069234.4-201ENST00000621276 412 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AL121594.5-201ENST00000631724 573 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AC015689.2-201ENST00000528172 1738 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MTCO1P6-201ENST00000481192 1384 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 RNU6-1339P-201ENST00000363574 91 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 RNU6-98P-201ENST00000384173 107 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 SNORD116-12-201ENST00000384468 92 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL445238.1-204ENST00000400311 463 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL354890.1-201ENST00000413730 346 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 BX284632.2-201ENST00000421091 399 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC016027.5-201ENST00000427227 210 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 BX323845.3-201ENST00000428215 527 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL512605.1-202ENST00000441919 381 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL359955.2-201ENST00000445380 353 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC068135.1-201ENST00000446164 246 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 ZNF619P1-201ENST00000446539 752 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL589880.1-201ENST00000448271 287 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 NPM1P19-201ENST00000450070 712 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms