Protein–RNA interactions for Protein: Q15413

RYR3, Ryanodine receptor 3, humanhuman

Predictions only

Length 4,870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYR3Q15413 PRDX3P3-201ENST00000447765 522 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 AL162151.2-201ENST00000448875 158 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 EIF2S2P5-201ENST00000457635 968 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 RPS17P5-201ENST00000498293 408 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 AC137627.1-201ENST00000545761 289 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 AL049779.3-201ENST00000557141 606 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.2□□□□□ -1.9
RYR3Q15413 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.2□□□□□ -1.9
RYR3Q15413 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.2□□□□□ -1.9
RYR3Q15413 H3F3BP2-201ENST00000583907 357 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RYR3Q15413 AL031985.2-201ENST00000600955 480 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC3.2□□□□□ -1.9
RYR3Q15413 AC099669.2-201ENST00000616549 437 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 NCOA4P3-201ENST00000513203 1877 ntBASIC3.2□□□□□ -1.9
RYR3Q15413 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RYR3Q15413 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RYR3Q15413 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RYR3Q15413 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RYR3Q15413 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 AP000997.2-201ENST00000564619 8400 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.19□□□□□ -1.9
RYR3Q15413 HMGB1P4-201ENST00000455362 567 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 OSTCP1-201ENST00000455507 450 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.19□□□□□ -1.9
RYR3Q15413 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.19□□□□□ -1.9
RYR3Q15413 CYP4F27P-201ENST00000514557 494 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC3.19□□□□□ -1.9
RYR3Q15413 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.19□□□□□ -1.9
RYR3Q15413 AC105137.1-201ENST00000484355 562 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 AL358832.1-201ENST00000497800 389 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.19□□□□□ -1.9
RYR3Q15413 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.19□□□□□ -1.9
RYR3Q15413 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.19□□□□□ -1.9
RYR3Q15413 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 VN1R21P-201ENST00000426703 765 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 BX323845.1-201ENST00000432417 179 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.19□□□□□ -1.9
RYR3Q15413 AC016559.2-201ENST00000510759 359 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.19□□□□□ -1.9
RYR3Q15413 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.19□□□□□ -1.9
RYR3Q15413 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.19□□□□□ -1.9
RYR3Q15413 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.19□□□□□ -1.9
RYR3Q15413 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
RYR3Q15413 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC3.19□□□□□ -1.9
RYR3Q15413 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.19□□□□□ -1.9
RYR3Q15413 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RYR3Q15413 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.19□□□□□ -1.9
RYR3Q15413 ANKRD36P1-201ENST00000344424 659 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 WBP1LP4-201ENST00000505043 344 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 IPO5P1-202ENST00000600039 287 ntBASIC3.19□□□□□ -1.9
RYR3Q15413 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RYR3Q15413 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
RYR3Q15413 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.18□□□□□ -1.9
RYR3Q15413 AC006210.2-201ENST00000367074 1545 ntBASIC3.18□□□□□ -1.9
RYR3Q15413 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RYR3Q15413 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RYR3Q15413 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RYR3Q15413 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.18□□□□□ -1.9
RYR3Q15413 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.18□□□□□ -1.9
RYR3Q15413 RN7SL600P-201ENST00000581811 299 ntBASIC3.18□□□□□ -1.9
RYR3Q15413 AC011497.2-201ENST00000600255 639 ntBASIC3.18□□□□□ -1.9
RYR3Q15413 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC3.18□□□□□ -1.9
RYR3Q15413 AC083843.3-201ENST00000623679 2186 ntBASIC3.18□□□□□ -1.9
RYR3Q15413 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms