Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC090022.1-201ENST00000546569 311 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 LSM3P2-201ENST00000551246 273 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 NDUFB4P11-201ENST00000560510 395 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 SUMO2P15-201ENST00000604285 278 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC037198.3-201ENST00000616754 526 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC010809.3-201ENST00000621310 641 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC138965.3-201ENST00000623875 498 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC004808.2-201ENST00000627965 773 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS1Q01581 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS1Q01581 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 TET1P1-201ENST00000426627 2301 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS1Q01581 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS1Q01581 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS1Q01581 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS1Q01581 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 RNU1-43P-201ENST00000365052 165 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 AP000534.2-201ENST00000412729 568 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 SMC4P1-201ENST00000414479 527 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 GNG5P5-201ENST00000420444 220 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 OR5M12P-201ENST00000423388 929 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 TXNP5-201ENST00000441043 315 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 AC004980.3-201ENST00000447046 365 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 AC093166.2-201ENST00000455969 1017 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 SCARNA21.2-201ENST00000516600 166 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 AC024940.3-201ENST00000538551 316 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS1Q01581 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 AL672167.1-204ENST00000641875 3017 ntBASIC4.87□□□□□ -1.63
HMGCS1Q01581 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS1Q01581 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS1Q01581 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS1Q01581 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS1Q01581 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC093591.2-201ENST00000565254 3843 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 RNU6-249P-201ENST00000363016 102 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 RN7SKP113-201ENST00000363891 295 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AL355433.1-201ENST00000422804 300 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC012512.1-201ENST00000446594 718 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 BTF3P6-201ENST00000448054 499 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 AL356981.1-201ENST00000454879 684 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 RN7SL30P-201ENST00000488416 306 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS1Q01581 AGGF1P9-201ENST00000561884 913 ntBASIC4.86□□□□□ -1.63
HMGCS1Q01581 MIR1269B-201ENST00000580405 75 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms