Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SNORA79B-201ENST00000410557 148 ntBASIC3.88□□□□□ -1.79
CCL20P78556 HMGN1P20-201ENST00000411849 300 ntBASIC3.88□□□□□ -1.79
CCL20P78556 AL160275.2-201ENST00000412010 394 ntBASIC3.88□□□□□ -1.79
CCL20P78556 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL20P78556 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.88□□□□□ -1.79
CCL20P78556 GTF2IP2-201ENST00000424290 697 ntBASIC3.88□□□□□ -1.79
CCL20P78556 AL662874.1-201ENST00000426065 230 ntBASIC3.88□□□□□ -1.79
CCL20P78556 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL20P78556 AC093414.1-201ENST00000434712 514 ntBASIC3.88□□□□□ -1.79
CCL20P78556 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL20P78556 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL20P78556 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL20P78556 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 RN7SL443P-201ENST00000464331 290 ntBASIC3.88□□□□□ -1.79
CCL20P78556 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.88□□□□□ -1.79
CCL20P78556 RN7SKP5-201ENST00000517045 272 ntBASIC3.88□□□□□ -1.79
CCL20P78556 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 AC079905.1-201ENST00000549280 475 ntBASIC3.88□□□□□ -1.79
CCL20P78556 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL20P78556 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL20P78556 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 RBM22P12-201ENST00000567098 1255 ntBASIC3.88□□□□□ -1.79
CCL20P78556 RBM22P1-201ENST00000578589 1214 ntBASIC3.88□□□□□ -1.79
CCL20P78556 RN7SL657P-201ENST00000582431 293 ntBASIC3.88□□□□□ -1.79
CCL20P78556 SLC25A36P1-201ENST00000590111 465 ntBASIC3.88□□□□□ -1.79
CCL20P78556 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.88□□□□□ -1.79
CCL20P78556 AC104687.2-201ENST00000604442 342 ntBASIC3.88□□□□□ -1.79
CCL20P78556 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL20P78556 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.88□□□□□ -1.79
CCL20P78556 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCL20P78556 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL20P78556 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL20P78556 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCL20P78556 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
CCL20P78556 LYARP1-201ENST00000436977 1501 ntBASIC3.87□□□□□ -1.79
CCL20P78556 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL20P78556 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCL20P78556 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL20P78556 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL20P78556 MIR133B-201ENST00000362210 119 ntBASIC3.87□□□□□ -1.79
CCL20P78556 U3.3-201ENST00000362986 216 ntBASIC3.87□□□□□ -1.79
CCL20P78556 MIR137-201ENST00000385223 102 ntBASIC3.87□□□□□ -1.79
CCL20P78556 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL20P78556 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CCL20P78556 GABARAPL3-201ENST00000412799 354 ntBASIC3.87□□□□□ -1.79
CCL20P78556 PDSS1P1-201ENST00000422953 1114 ntBASIC3.87□□□□□ -1.79
CCL20P78556 BX323845.1-201ENST00000432417 179 ntBASIC3.87□□□□□ -1.79
CCL20P78556 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL20P78556 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.87□□□□□ -1.79
CCL20P78556 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.87□□□□□ -1.79
CCL20P78556 AC118758.1-202ENST00000454719 225 ntBASIC3.87□□□□□ -1.79
CCL20P78556 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC3.87□□□□□ -1.79
CCL20P78556 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.87□□□□□ -1.79
CCL20P78556 AC012400.1-201ENST00000518452 381 ntBASIC3.87□□□□□ -1.79
CCL20P78556 KCTD9P6-201ENST00000522306 950 ntBASIC3.87□□□□□ -1.79
CCL20P78556 AC012339.2-201ENST00000523996 453 ntBASIC3.87□□□□□ -1.79
CCL20P78556 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL20P78556 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC3.87□□□□□ -1.79
CCL20P78556 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
CCL20P78556 BTG1P1-201ENST00000540396 508 ntBASIC3.87□□□□□ -1.79
CCL20P78556 AC008126.1-201ENST00000549019 480 ntBASIC3.87□□□□□ -1.79
CCL20P78556 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL20P78556 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.87□□□□□ -1.79
CCL20P78556 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL20P78556 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC3.87□□□□□ -1.79
CCL20P78556 AL669942.2-201ENST00000620352 697 ntBASIC3.87□□□□□ -1.79
CCL20P78556 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.87□□□□□ -1.79
CCL20P78556 TMEM30CP-203ENST00000637814 1035 ntBASIC3.87□□□□□ -1.79
CCL20P78556 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL20P78556 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL20P78556 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL20P78556 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL20P78556 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.86□□□□□ -1.79
CCL20P78556 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCL20P78556 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCL20P78556 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CCL20P78556 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CCL20P78556 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 COX6B1P3-201ENST00000312310 260 ntBASIC3.86□□□□□ -1.79
CCL20P78556 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL20P78556 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCL20P78556 AL080315.1-201ENST00000406055 466 ntBASIC3.86□□□□□ -1.79
CCL20P78556 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.86□□□□□ -1.79
CCL20P78556 Z93019.1-201ENST00000416450 973 ntBASIC3.86□□□□□ -1.79
CCL20P78556 EI24P4-201ENST00000423683 1078 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms