Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL096712.1-201ENST00000614561 159 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.58□□□□□ -1.68
CX3CL1P78423 AC024023.1-201ENST00000624530 922 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 AC004808.1-201ENST00000627671 721 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 MAPK10-338ENST00000641647 3362 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CX3CL1P78423 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CL1P78423 HSPD1P11-201ENST00000508643 1702 ntBASIC4.58□□□□□ -1.68
CX3CL1P78423 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC068870.3-201ENST00000625077 2536 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CX3CL1P78423 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 RNU6-452P-201ENST00000384406 107 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 RNU6-185P-201ENST00000384421 107 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 RNA5SP91-201ENST00000390902 119 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AL355615.1-201ENST00000406187 641 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 RNA5SP498-201ENST00000411342 120 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AL357752.1-201ENST00000412817 349 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 HYALP1-201ENST00000417674 1279 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 RPS4XP16-201ENST00000427198 791 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.57□□□□□ -1.68
CX3CL1P78423 FTLP19-201ENST00000433300 394 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 YWHAZP2-201ENST00000440317 728 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC097499.1-201ENST00000444277 208 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 RPL34P26-201ENST00000445636 354 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 OR52E7P-201ENST00000452394 933 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 RPS23P2-201ENST00000463671 415 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC096741.1-201ENST00000472250 846 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC010374.1-201ENST00000503762 1237 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC139365.2-201ENST00000517972 253 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC010476.1-201ENST00000519111 851 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AC138701.1-201ENST00000524329 714 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AP000859.1-201ENST00000525536 307 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC126615.2-201ENST00000553003 515 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC009852.2-201ENST00000567898 485 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 MIR4675-201ENST00000577898 77 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 MIR4660-201ENST00000583549 74 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 NANOGP3-201ENST00000605855 286 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC138965.3-201ENST00000623875 498 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC129915.3-201ENST00000634128 948 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AC083865.1-201ENST00000636634 831 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CX3CL1P78423 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 CASC19-284ENST00000642142 1868 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CX3CL1P78423 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC011933.2-201ENST00000578539 2790 ntBASIC4.57□□□□□ -1.68
CX3CL1P78423 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CL1P78423 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CX3CL1P78423 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 AC007342.5-201ENST00000571340 2142 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms